Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0090 |
Symbol | |
ID | 8356187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 109177 |
End bp | 109734 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644962235 |
Product | hypothetical protein |
Protein accession | YP_003119797 |
Protein GI | 256419144 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAAACC AGCTTATCAC AATGGCAGCA TGTCTGTCAA TTTTCTCATT CACTGCTTGC CAGCAGTCCC AAAACGCACA AAGTGCAGAG AATGACACTA CCCAACAAGC AGCACCTGAC ACGACTGCTA CTGTAGCGGA AACACCAGCA GCAGATACCA GTGCTGCAGC AGCCCTGACA ACCGTAATGT CTGCCCCTGA AAAAGTAAAA GCAGGTGCTC CGATCATGGT GAAATTTACA GTAACCAACA ATTCCGATAA GGAAGCTGAG TTCTGTAAAT GGCACACACC ATTCGAAGAG AAATTCCTGA ATTCCTTCTT CGAGATCCAG GACAGCAAAG GGGAGTCTGC GCAGTACCAG GGTGTAATGG CAAAAAGAAT CATGCCTCCT CCGGCAGAAT CATTCATTAA AGTGCCTGCA AAAGGAACTG TATCTGCAGA GATTGATCTG ACCAAAGGTT ATAAGATCTC CGCTCCTGGT ACTTACAAAG TAGCCTACCA GGGTGACGGT ATCAGTGGTC TGAAGAATGT AAACACAGTA TCTGTGACTG TCGAGTAA
|
Protein sequence | MRNQLITMAA CLSIFSFTAC QQSQNAQSAE NDTTQQAAPD TTATVAETPA ADTSAAAALT TVMSAPEKVK AGAPIMVKFT VTNNSDKEAE FCKWHTPFEE KFLNSFFEIQ DSKGESAQYQ GVMAKRIMPP PAESFIKVPA KGTVSAEIDL TKGYKISAPG TYKVAYQGDG ISGLKNVNTV SVTVE
|
| |