| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0089 |
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| Symbol | |
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| ID | 8356186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 106979 |
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| End bp | 109012 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644962234 |
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| Product | protein of unknown function DUF1680 |
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| Protein accession | YP_003119796 |
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| Protein GI | 256419143 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3533] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCA CTGCTATTAT TCCACTATTT GTTATGGGCT TCTCCTGCGT CGTTACAGGT
CAGACGAGGA GGCATACCAC ACAGGTCCAA CAGTACATTG CTAATCGTGC TCCACTGCAG
GAAAAACCTT ACATCGAACT GCCCCTTGGT TCCATTGAAC CACAGGGATG GCTGCGCACA
ATGCTTGTTA ATCAGAAAAA CGGCGCTACC GGACAACTTG ATAAGTTGTA CCCCCTGGTC
ATGAATCACA GAAATGGCTG GCTGGGTGGT GATGGCGACC AATGGGAACG TGGTCCTTAC
TGGATTGATG GTTTATTACC ATTGGCTTAC ATCCTTAAAG ACACCGCGCT GATCGCCAAA
GTAAAGCCCT GGATTGAATG GTCTATCAGG AGTCAGCAAC CGGACGGCTA CTTTGGTCCT
GCTACCGATT ATCCGGCAGA ACCGGGCCTG CAACGCGATA ATAGTCGCGA TTGGTGGCCC
AAGATGGTCA TGCTCAAAGT GCTGAAGCAA TATTACTCGG CTACAGGCGA CAAACGTGTG
ATTACCCTGC TGACCAACTA TTTCCGCTAT CAGCTGAACG AACTGCCGAA ACATCCGCTT
GATCATTGGT CTTTCTGGGG AAAGTACCGT GGTGGCGATA ATCTGATGGT CGTTTACTGG
TTGTACAACA TCACCGGAGA TAAATTCCTC CTGGATCTCG CAGAGCTGGT GCATAAGCAG
ACCTTCGACT ATACCGAAGC CTTCCTGCAT GGCGATCTGT TGCGCAGACC ATTCAGTATC
CACGGTGTTA ATCTGGCACA GGGTATTAAA GAACCGGGTA TCTATTATCA GCAACATCCG
GAGAAGAAAT ATTTGGATGC CTTGCAGACG GGCTTCAAAG ATCTGCGTTT TTATAACGGG
ATGGCGCATG GTCTGTATGG TGGTGATGAA GCCTTACATG GTAACAATCC TACACAGGGT
TCAGAGCTTT GTACGGCGGT AGAGATGATG TTTTCCCTGG AAAGCATCCT GGAGATCACC
GGAGATGTGG CCTATGCAGA TCACCTGGAG AAAATTGCCT TTAACGCTTT ACCTGCACAG
GTCTTTGAAA ACTTTATAGA CCGCCAGTAT TTTCAGCAGG CCAATCAGGT AATGGCGACC
CGTTACGTGC GTAACTTTGA TCAGAATCAT GCAGGCACAG ATGTTTGCTA TGGTTTGCTG
ACGGGTTATC CCTGCTGTAC TTCAAATATG CATCAGGGTT GGCCGAAGTT CACACAAAAC
CTCTGGTACG CTACGGCTGA CAAAGGCATT GCCGCATTAG TTTATGCACC AAGTACGGTG
ACTACCTATG TAGGTGAACA AACACCGGTG TCTTTTAAAG AAGAAACAGC CTATCCATTC
GGGGAATCCG TTCGTTTCAC TTTTTCTACC AGTAAGAAGA CAAGTGCAGT TTCCTTCCCG
TTTCATCTGC GTGTACCTGC CTGGTGTAAA CAGGCTACCA TCAAGGTAAA CGGGCAGGTA
TTCCAGCAGT CGCCAGGTAA TCAGATCGTA AAAATAGAGC GTAGCTGGAA ATCGGGAGAC
ATCGTAGAAT TGATACTTCC TATGCATATT TCACAAAGCA GATGGTATGA AAACTCGGTG
TCTGTTGAAC GTGGTCCGGT GACTTATGCA TTGAAGATGG GAGAATCTGT TAAGAAAGTG
GCCGTTGAGA AAGAAGCGGT GGCATTTGGT AACGCTTATT ATGAAGTGCA TCCCACTACA
CCATGGAATT ACGCGTTGCT GGAAGTACCG GAAGATCAGC TGCAACTATG GTATGCAGTG
GAAAAGAAGG ACAGTCTGGT CAGCTATCCA TGGAATCAGG AACATGCACC GATAGTGATC
CGTACAAAAG CGAAGCGTAT CCCTTCATGG AGTCTTTACA ATGAAATGAC GGGCCCTGTT
CCATTCTCTA TGATGTGGGG ATTGGAGACA ATGCCGGCCG AAGAAATTAC ACTTATTCCA
TACGGTTGTA CCAAACTGCG TGTATCGCAG TTCCCGATGG TATGGAGGCA GTAG
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| Protein sequence | MKITAIIPLF VMGFSCVVTG QTRRHTTQVQ QYIANRAPLQ EKPYIELPLG SIEPQGWLRT
MLVNQKNGAT GQLDKLYPLV MNHRNGWLGG DGDQWERGPY WIDGLLPLAY ILKDTALIAK
VKPWIEWSIR SQQPDGYFGP ATDYPAEPGL QRDNSRDWWP KMVMLKVLKQ YYSATGDKRV
ITLLTNYFRY QLNELPKHPL DHWSFWGKYR GGDNLMVVYW LYNITGDKFL LDLAELVHKQ
TFDYTEAFLH GDLLRRPFSI HGVNLAQGIK EPGIYYQQHP EKKYLDALQT GFKDLRFYNG
MAHGLYGGDE ALHGNNPTQG SELCTAVEMM FSLESILEIT GDVAYADHLE KIAFNALPAQ
VFENFIDRQY FQQANQVMAT RYVRNFDQNH AGTDVCYGLL TGYPCCTSNM HQGWPKFTQN
LWYATADKGI AALVYAPSTV TTYVGEQTPV SFKEETAYPF GESVRFTFST SKKTSAVSFP
FHLRVPAWCK QATIKVNGQV FQQSPGNQIV KIERSWKSGD IVELILPMHI SQSRWYENSV
SVERGPVTYA LKMGESVKKV AVEKEAVAFG NAYYEVHPTT PWNYALLEVP EDQLQLWYAV
EKKDSLVSYP WNQEHAPIVI RTKAKRIPSW SLYNEMTGPV PFSMMWGLET MPAEEITLIP
YGCTKLRVSQ FPMVWRQ
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