| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0084 |
|---|
| Symbol | |
|---|
| ID | 8356181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 99721 |
|---|
| End bp | 101799 |
|---|
| Gene Length | 2079 bp |
|---|
| Protein Length | 692 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644962229 |
|---|
| Product | translation elongation factor G |
|---|
| Protein accession | YP_003119791 |
|---|
| Protein GI | 256419138 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAT TGGATAACTT CAGAAATATA GGAATCATGG CGCATGTCGA TGCAGGTAAA
ACCACTGTTA CTGAACGCAT GCTTTATTAT ACAGGTCTTA CACACAAGCT GGGTAGCGTT
GATGAAGGAA ATACCGTGAT GGATAGCGAT CCGCAGGAAG AAAAAAGAGG TATTACCATC
TCTTCTGCTG CGATCACGAC CTACTGGCAA TTAGATAATA ATAAATACCA GGTGAACATC
ATTGATACGC CCGGTCACAT TGACTTCACT GCTGAAGTAG AACGTTCCCT GCGTGTACTG
GATGGCGCTA TTGCTGTATT CTGCGCGAAA TCTGGTGTGC AGCCGCAATC TGAAACAGTA
TGGCAACAGG CGAACCGTTA TAATGTACCC CGCATTATTA TGATCAATAA GATGGACAGA
CAAGGTGCTG ACTTCCGTCG CGTAGTAAAC GAGATCCGTG ATATGTTGCA CGCAAATGCA
GTTCCTGTGC AGATACCGAT TGGTGCAGAG GATGATTTCT CTGGTGTGAT AGATCTGATC
GCAATGAAGG CGTATGTCTG GAGTGGTGAT GATGGTAAGT CTTATTCCGT TACAGATATC
CCTGCGCATT TGCAGGAAGA AGCGATGCAG GCACGTGTGG TCTTGTTAGA AGAGTTGTCT
TTGTATGATG AAGTGATCTT CAATAGTTAT ACGAATGATC CGGCTAGCGT AGCAGCGGAA
GATATCTATC GTGCCTTACG TCAGACTACC TTACAGATGC AGGTAATACC TGTACTGGCT
GGTGCAGCTT ATCGCAATAA GGGCGTACAG CCTTTGCTGG ATGCTGTTGT ACGTTATCTG
CCTGCGCCGG TTGATATGCC GCAGATACAT GCAGTGGATG TTGAAACAGA AGAAGCTACA
ATGCTTACTG CCAGTGAAGA AAGTCCGTTT GCTGCCTTAG CATTTAAGAT CATCTCTGAT
GATTATGCCG GTAAACTGAC AATGGTCAGG GTGTATTCCG GTGTATTGCG TACAGGTGAC
TCCGTGTGGA ATAGTCGTAC TGGTAAACAT GTGCGTATCA GTCGCCTGAT GCGTATCATG
TCAGATAAAT ATGAAACTGC GGATGCGATC ACTGCCGGGG ATATTGGCGC GGTGGTAGGG
TTAAAAGATG TGCGCACAGG CGATACGCTG TCTGATCCGG ATCAACCGGT ATTACTGGAA
AAGATCAGTT TCCCTGAACC TATGATCGGC TATGCGATTG AAGCAAAAGT GGCAAAAGAT
GTGAGTAAGC TGAGTGAGGC ACTGTCAAAA CTGGTAGAAG AAGATCCTAC GCTGAGTGTA
AGTGTAGATC CGGCTTCAGG TCAGACCATC CTGAAAGGTA TGGGCGAGCT GCACCTGGAA
GTTGTACTGG AAAAACTGAC GAGCAACTAT CATGTTGAGA TCAGTAAAGG TCAGCCACAG
ATTGCGTATA AGGAAGTGTT CACGCAGGCG ATTGAACACA AGGAAGTGTA TAGTAAGCAG
AACGGTGGTT CTGGTAGCTT CGCAGAGATT GTGTTTGAAT TGTCGCCACG TGAAGACGGA
CAAGCAGGTC TTGAGTTTGT GAATGAAGTG ACTGGTGGAG CAATTCCCCG TGAATTCATT
CCTGCTGTGA AGAAAGGATT TGAAGAGGCG ATGAAGACCG GTGCATTGGC GGGTTATCCG
GTACAATCCA TGAAAGTGCG TTTGCTGGAT GGATCTATGC ATGTAAAAGA CTCTCATGCG
CAGGACTTTG AACATGCTGC TATCCTGGGC TTCCGTCATG CTGCACTGAA AGCCGCTCCC
CGTTTACTGG AGCCTTTCAT GAGCGTAGAA GTGACCTTGC CTGAAGAACA TACCGGCGCT
ATCACCGGTG ATCTGAACAG ACGCCGTGGT GTGATCAAAG GAATGGAAAT GAAGGCGAGT
GCCCAGTATA TCAGGGCCGA GGCGCCTTTG TCTGATTTGT TTGGATATGT GAACACCCTG
CGTGCATTGT CATCCGGCAG AGCCGCTGCT TCTGTCACTT TCCAGGAGTA TCAGCTGGTG
CCTAATAATA TTGCCGGTAG AGTACTGGCA ACAATCTGA
|
|---|
| Protein sequence | MKRLDNFRNI GIMAHVDAGK TTVTERMLYY TGLTHKLGSV DEGNTVMDSD PQEEKRGITI
SSAAITTYWQ LDNNKYQVNI IDTPGHIDFT AEVERSLRVL DGAIAVFCAK SGVQPQSETV
WQQANRYNVP RIIMINKMDR QGADFRRVVN EIRDMLHANA VPVQIPIGAE DDFSGVIDLI
AMKAYVWSGD DGKSYSVTDI PAHLQEEAMQ ARVVLLEELS LYDEVIFNSY TNDPASVAAE
DIYRALRQTT LQMQVIPVLA GAAYRNKGVQ PLLDAVVRYL PAPVDMPQIH AVDVETEEAT
MLTASEESPF AALAFKIISD DYAGKLTMVR VYSGVLRTGD SVWNSRTGKH VRISRLMRIM
SDKYETADAI TAGDIGAVVG LKDVRTGDTL SDPDQPVLLE KISFPEPMIG YAIEAKVAKD
VSKLSEALSK LVEEDPTLSV SVDPASGQTI LKGMGELHLE VVLEKLTSNY HVEISKGQPQ
IAYKEVFTQA IEHKEVYSKQ NGGSGSFAEI VFELSPREDG QAGLEFVNEV TGGAIPREFI
PAVKKGFEEA MKTGALAGYP VQSMKVRLLD GSMHVKDSHA QDFEHAAILG FRHAALKAAP
RLLEPFMSVE VTLPEEHTGA ITGDLNRRRG VIKGMEMKAS AQYIRAEAPL SDLFGYVNTL
RALSSGRAAA SVTFQEYQLV PNNIAGRVLA TI
|
|---|
| |