Gene Cpin_0074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0074 
Symbol 
ID8356171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp88783 
End bp89331 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content46% 
IMG OID644962219 
Producthypothetical protein 
Protein accessionYP_003119781 
Protein GI256419128 
COG category[S] Function unknown 
COG ID[COG3236] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02464] conserved hypothetical protein, ribA/ribD-fused 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACA ATAATGATTG GTTAATCCGC AAGTACAAGA CGAAAGAAAA ATTAAACTTC 
ACCTTCTTCT GGGGACATAA AGGTGAACCC GGCAACGTGA CAAAAAGCTG CTTCAGTCAA
TGGTGGCCCT CCGCTTTTAC AGATGGTACA CATACCTATG CGACCGCTGA ACACTGGATG
ATGGCTGGCA AAGCACGCCT GTTTAAAGAC CCCGCTATGG AACAGGAAAT ATTACAGACC
TCAGACCCTG CTACTGCCAA AAAACTAGGC AGAAAAGTGG CAAACTTTGA TACCGCCTTA
TGGGATGTTG AAAAATTCTC CCTCGTTGTA CAAGGGAACC TCCTGAAATT TTCTCAATAC
CCTAAAATGA AGGAATTCCT GCTCAGCACA GGCGATAGCA TCATCGTAGA AGCCAGTCCC
CTCGATAGAA TATGGGGTAT CGGCATGGGC GCAAATCACG AACACGCGGC CAACCCTTTA
CTATGGAAAG GTCAGAACCT CCTGGGCTAC GCCCTGATGG AGGTCAGAGA CCAGTTAAAA
CAACAATGA
 
Protein sequence
MKYNNDWLIR KYKTKEKLNF TFFWGHKGEP GNVTKSCFSQ WWPSAFTDGT HTYATAEHWM 
MAGKARLFKD PAMEQEILQT SDPATAKKLG RKVANFDTAL WDVEKFSLVV QGNLLKFSQY
PKMKEFLLST GDSIIVEASP LDRIWGIGMG ANHEHAANPL LWKGQNLLGY ALMEVRDQLK
QQ