Gene Cpin_0073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0073 
Symbol 
ID8356170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp88100 
End bp88777 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content48% 
IMG OID644962218 
ProductNUDIX hydrolase 
Protein accessionYP_003119780 
Protein GI256419127 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCCT TTCACAGTTA TCAGAACCCC TCCCTCGCAG TGGACCTGGT CGTATTCGGT 
TATAGCAAAC AACAGCTTGC CGTCCTGCTG CTTAACAGGA AAGAAGAACC GTTTAAAGAC
TGCTGGGTAC TGCCCGGAGC CTTCCTGCAA ATGGAAGAAC GCTTCCGTGA TACCTGTTCA
AGGGTACTGA AAACCAAGCT AGGTATGGAT GATGTCTATA TGGAACAGCT GTACTCCTTT
GACGAACCGG AACGTGATCC CCGTGGACGC GCCATTGCCG TCGCCTACTA TGCTCTGGTT
AACCCCGCGC GTGTAGCCAT TTCAGCCGGC AATATGGCCA ATGACGTAGC CTGGTTTAAT
ATCAAGGAAC TACCCAAACT GGGCTTCGAT CACCATGCCA TCTTTGAAAT CGCCCTGCAA
CGGCTCCGTT CTAAGATTAC CTATTTCCCG GTAGGCTTCG AACTGCTGGA CGAATTGTTC
ACCATGCCCG AGCTGCATGA ACTATATGAA TGTATCCTGG ATACCACGAT CGACCGCCGC
AATTTCAGAA GGAAGATCAT GGACTCTGAA TACATTATTA ACACCGGGAA TAAACGGGAA
GGTGCACAAA ACAGACATCC CGATCTGTAT AAATTCAATA AGAAGCTGAA AAAGAACAGC
TTCCAGATAA ATGTATGA
 
Protein sequence
MKSFHSYQNP SLAVDLVVFG YSKQQLAVLL LNRKEEPFKD CWVLPGAFLQ MEERFRDTCS 
RVLKTKLGMD DVYMEQLYSF DEPERDPRGR AIAVAYYALV NPARVAISAG NMANDVAWFN
IKELPKLGFD HHAIFEIALQ RLRSKITYFP VGFELLDELF TMPELHELYE CILDTTIDRR
NFRRKIMDSE YIINTGNKRE GAQNRHPDLY KFNKKLKKNS FQINV