Gene Cpin_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0062 
Symbol 
ID8356159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp77417 
End bp77956 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content46% 
IMG OID644962207 
Producthypothetical protein 
Protein accessionYP_003119769 
Protein GI256419116 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAATC ACTATACCAA CTTTATCAAA GATTTCGACG CACTCCCCAT CGAAGACATT 
GCCAATTTTT TCCACGACAA CGCCGGCCAG ATCGACACTT TAATCCAGCT CTACCAGGCA
TACAACAAAC GTATCCTGAA CATACAATGC AAACGCATAC ATGAGCTTAA ACAAGCCATC
ACCACTATCA CAACAGACGA CCAATGGTCT GACATGGAAG GACTCGAACT CACCTACGAC
CAGTTCATGC CCAACATCAC CATTACGGGC GGATTTGCCT CCAATGCAAC CGATCCATTA
CATACATTCA ATATTGAAAT AAGCGTCCCT GACGACCATT CCTGGAACCA TTACGAAAAC
CACCTGATCA GCCGTTATCC AGGCCAGGAG CCAATAATAA AAGGCGATAG CACCATTCTA
CACATCGCCG CCCGCCCCGG CAATGAGACC ACAACCATCC TCAGCACCCT CGAAGAAGTG
TATTCATTCC TGTCCAGCCT CACTGTCAAT ACTTTTTTCC ACTCGTTAAC ATCTCATTAA
 
Protein sequence
MMNHYTNFIK DFDALPIEDI ANFFHDNAGQ IDTLIQLYQA YNKRILNIQC KRIHELKQAI 
TTITTDDQWS DMEGLELTYD QFMPNITITG GFASNATDPL HTFNIEISVP DDHSWNHYEN
HLISRYPGQE PIIKGDSTIL HIAARPGNET TTILSTLEEV YSFLSSLTVN TFFHSLTSH