Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0060 |
Symbol | |
ID | 8356157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 73551 |
End bp | 74540 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644962205 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003119767 |
Protein GI | 256419114 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTCTA CCTTATTTAA AGCGAACAGA TTACTGCTGA TCGAGAAGAA CAGACAAGCT TATCTACCAG CGAGTAGTCT GCCTGTAGAA TATCTCAAGC TCATTATCCC TTACGCCGGA TTATATTTTC GGGCAGATGC CGCATGTGAA ATTCTTTCAC AGCATGTCAA TGTAGGTCCC TTCTCCCTAT GGATGCATGA TATCTTTGCG AAGGAACAAA TGATACTGTT ACCCTATACA CCGTATCATA TCTGGACATT GCATTTCATG TATGAAGATT CCTTGATTGT GGAAGGCAAT CTCAATTCCC CATATACACT CGAAGAACGG GAATGTAACC TGTTCAATTT GTACCCGGGG TTACATCGTA TTCCTATGGC AGATAATACG AAAGTATTGT CCGTCCATAT TAACATCCGG CCAGAGTTCC TTCCAGCGTT GGCAGCGAAA TATCCTCAAA TGAGGGATTT ACTAAATCGC CCTATGGCTG CGCAAAGCAG CGCTTTGAAT GCACATCCGC ATCATGTTAA CCTGGTATGT GACTATTTAA TTCAGAAGAT CCTGACCTGT AAATACACGG GTAAAAAAGC GCATCTCTTC CTTTACCGTT GTTGCCTTGA TTTGCTGTTA AACTTCGCCA CACAGGAGGC ATATGCACAT GAGCCATTCC TGTTTAGCAG TCTGGCACAC CAGGACGCTT ACCGGCAGCT GTTTCATTTT ATGATCGAGC ATCCGCATAA ACCCTGCTCC GTAGCAGAAT TAGCTTTGAT GTTTGATATT CCTTTTGCAG AATTGGAAAA AGGATTTCTG CAGCATTATT CCGTCTCCAT CCAGGATTTC GGACATATGG TGCAGATGAT GATGGCATTT AATGTGCTGC ATCAGAAACA TTGGTCATTG GACGCGATTG CGGACGCAAC CGGTTTCAGC CATTCAAATG AGCTGGCAGC GGCATTGGAG AATTATTACG CGTTCAAATT GAAAAAGTAG
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Protein sequence | MRSTLFKANR LLLIEKNRQA YLPASSLPVE YLKLIIPYAG LYFRADAACE ILSQHVNVGP FSLWMHDIFA KEQMILLPYT PYHIWTLHFM YEDSLIVEGN LNSPYTLEER ECNLFNLYPG LHRIPMADNT KVLSVHINIR PEFLPALAAK YPQMRDLLNR PMAAQSSALN AHPHHVNLVC DYLIQKILTC KYTGKKAHLF LYRCCLDLLL NFATQEAYAH EPFLFSSLAH QDAYRQLFHF MIEHPHKPCS VAELALMFDI PFAELEKGFL QHYSVSIQDF GHMVQMMMAF NVLHQKHWSL DAIADATGFS HSNELAAALE NYYAFKLKK
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