Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0059 |
Symbol | |
ID | 8356156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 72396 |
End bp | 73538 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644962204 |
Product | anti-FecI sigma factor, FecR |
Protein accession | YP_003119766 |
Protein GI | 256419113 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGGTAG ATCCCGAATA CATTGAACAA TTGGTATTGG AAGAAATAGC GGGAACCATT TCTCCTGAAG ACAGTACCAC CCTCAAAGAT CTCCTGGAAA ATGACGCTGA TGCATATGCT ATCTGGCTGA ATATGCACAG ACAACTGACA GGTAATCATA TTCAATCCAT ACGAGAAAAC CTTCCGAATA CGCTGCCTGC GTCACAGATC ATCGCTGTGG CTGGTAAACG TAAACGGCGG AAGATACTGG TAAAAACGAG TTTGAGCGCA GCAGCCGTAT TGTTGCTGAC GGCTGCTGTA TGCTATAAAT TATTGTTCCC GGCGTTCCAG CCAGTTTCGC CGGGCGCAAT CCCATCTTTT GCCCTCAAAT CTGTTATGCT GCAGCTGCCC AACGGAGCGT ATTTCTTACT GGGCAGCGGG CAGCAGCAGT TCAAGGCGGG TGGGACCAAT TTCCGGGAAA CAGCCGGAAA GCTGTCCTGG TCCGGTGGAG GTACCGAATC CCAGCTCGCT ACCATAATTG TTCCACCGGA CGAGGACTAC ACTGTACAGC TGGCGGATGG GTCTGAGGTC ATATTGAACG CGGATAGCCG GATGGATTTC CCGCTGACCT TTGGTAGCAA AAGAGATATC AGGATTAGTG GAGAAGCATA TATACAGGTA GCACAAAAAG AGAATCAACC ATTCCAGGTA CATCTGCCTA ACAGCACAGT GCAGGTGTTG GGCACCTCAT TCAATGTGAA CACTTATGAG GCCCGGCAGG AACAGGTACT ATTGGAAACC GGGGCTGTTA AAATGCTGAC AGCGGATGGG GATGTGCTTT TACATCCTGG TCAGGCGGTA AAATATCAAC CAGGACAAGT ACCAATTATC AATGATGTGG ATACCGCAAT AGCATTAGCA TGGAAGAGAG GATATTATAC CTTCCAGGCC ACCCCAATAA AAGAGGTAAG TAAAGTGATG GAGCGGAATT ATAGGGTGAA AGTGATCCTT GATAATGTAG CAACAGGGGA GCAGTTATAC TCCTCGCGAT TAGAAAAACA GGAAGACCTT GAAAAATTCC TGGCACGTTT AAAATCAATT GTTAAAATAG ATTATCAATT CGAAAAGGGC GACAGCGTTT TGCATTTGTC ATACAGACCG TAA
|
Protein sequence | MPVDPEYIEQ LVLEEIAGTI SPEDSTTLKD LLENDADAYA IWLNMHRQLT GNHIQSIREN LPNTLPASQI IAVAGKRKRR KILVKTSLSA AAVLLLTAAV CYKLLFPAFQ PVSPGAIPSF ALKSVMLQLP NGAYFLLGSG QQQFKAGGTN FRETAGKLSW SGGGTESQLA TIIVPPDEDY TVQLADGSEV ILNADSRMDF PLTFGSKRDI RISGEAYIQV AQKENQPFQV HLPNSTVQVL GTSFNVNTYE ARQEQVLLET GAVKMLTADG DVLLHPGQAV KYQPGQVPII NDVDTAIALA WKRGYYTFQA TPIKEVSKVM ERNYRVKVIL DNVATGEQLY SSRLEKQEDL EKFLARLKSI VKIDYQFEKG DSVLHLSYRP
|
| |