Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0052 |
Symbol | |
ID | 8356149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 62333 |
End bp | 63127 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644962197 |
Product | hypothetical protein |
Protein accession | YP_003119759 |
Protein GI | 256419106 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCAC CTAAAGAAAA CAGACACGTC ATTAAAAGAG TCCGCAGTCA TTCAAAAGAA ACACTGCACA ACGATAAAAG ATTTCAACGC GTTCGCGACA ACTGGAAGGA TTTTACCAGG GCAGCCCGCT ATGCAAAGCT GATGCGTACC GTCATGGAAA GTATGCAACA GCCCGTACAC GACAGAAGCA GGCATACTAC GCTCACTAAA ACATTCTCAC AGATAATAAA ATCAGACACT GATGCCCCTC CCGGACAACG CAACATCAGG CCCGGATTAC TGCATCTGTT AACAGGCATA GAATTAAATA CAGGAATTGC CTTGGATGAT CTTTTCATTT TCAATTACGC CATGACTGAA TGCAATATGC GGGATGCAAC ACACTACTTA GACCACACGA TGTTATATCC TAAGATAATT CGAAAAGTAT TACCTCCGGG TGTTGTTGAT TTTGAGATCA ATATCGGCGT AGCCGAAATA GACTTTGAAC AACTTACCTT CAGGTGCTAT CAGCAATCTT CTGCTTTGAT ACCGGTAAAA GGGAATAAAT TTTCCGGCGT AAAAATGGAA GCGCTTATTG GCCAGGAAGT ACCGGACCAT TTATTTGTAT TCCTGGCAAT CAGTTGCTAC GACAAGGATA AACAGTTTAA AACCGGCGCA ATTAGGCTGC TGAATGTTTT CGGTGCGCCG GGATACGGAG AATATTTATC TGCCACAAAA GCAGACCAAA TGCTGCTCCC AGAATCATGT TCAGCAACTG ATACCGAAGC ACCACCGGAG ATGCCAGCAC ACTAA
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Protein sequence | MTSPKENRHV IKRVRSHSKE TLHNDKRFQR VRDNWKDFTR AARYAKLMRT VMESMQQPVH DRSRHTTLTK TFSQIIKSDT DAPPGQRNIR PGLLHLLTGI ELNTGIALDD LFIFNYAMTE CNMRDATHYL DHTMLYPKII RKVLPPGVVD FEINIGVAEI DFEQLTFRCY QQSSALIPVK GNKFSGVKME ALIGQEVPDH LFVFLAISCY DKDKQFKTGA IRLLNVFGAP GYGEYLSATK ADQMLLPESC SATDTEAPPE MPAH
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