| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0050 |
|---|
| Symbol | |
|---|
| ID | 8356147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 59934 |
|---|
| End bp | 60914 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644962195 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003119757 |
|---|
| Protein GI | 256419104 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCAT TTTCACATGG AGATGCGAGG TTGCTTCCAT TGGAAGGAAA GCGTATTGGT
AATACGAATA CCGCCCGAAT ACCCGAAGAG TATCTTCAAT TATTATTGCC CTACGCCAAT
GTACACTGTT GGCAGAATGG CCAGGTGTAT GTATTGTCCC AGCATATGTT ACTGGGGGCC
TACTCCCTAT GGATCCATGA TGTTGTAGCA GATGGGGCGC AAGACATTCT TCCCTATGTG
CCGCACCCGC TTTACACACT ACATTATATG TTTGAAAGCG GACTGGACGT AAGAACGCCG
GATGCGGAAC CGTTCCACCT GGAAGAAGAC ACCTGTAATC TCTTTTATCT TGAACCAGGC
GTAAGCCGGC TGCCTTTGGA AGAAGATCTG AAGGCATTAT CCGTATTAAT CAACATATTA
CCCGAACATA TATCCGCGCT GACAAAAGAC TTTCCGGATC TCCACAAACG ACTGCAGCAA
CATCGCTTAG GTAACCAGGT GATCAACAAA CAACCGTTTA CCGTAACAAC TGTCAACCGG
ATGCTGATCT CCAGAATACT GACCTGCCGT TATCTCCGGG ATGACGCCGC TGTATTCCTG
GAAAGATGCT GCGCCGATCT CTTCCGTATA TTTTGTCGCC AGTATAATGT GGCCATGGTC
GTTCCTCCAG CAGAAAACGA CAACTACAAT AAAGTCTTCG AATACATGCG GACATACCCT
CATGCCCGCT GTGACCTGAG ATATTTTTCC CGGATGTTCC ACATACCAGA ACATGAGATG
GAAGCAGGCT TCCTGAGCTA TTTTGCCATC AGCATACATG ATTGCAGTCA TATGCTGAAG
ATGATGACCG CCTTTGATCT GATTATACAA CATGGTCAAT CCTTTGGTGA TATCGCAGTG
CGGATTGGAA TGGACACGGA AAGGATGATT CAAGCGATAG AAGCATATTA TAATATCAAA
GTTGCTGCGC AAAGAAACTA A
|
|---|
| Protein sequence | MSAFSHGDAR LLPLEGKRIG NTNTARIPEE YLQLLLPYAN VHCWQNGQVY VLSQHMLLGA
YSLWIHDVVA DGAQDILPYV PHPLYTLHYM FESGLDVRTP DAEPFHLEED TCNLFYLEPG
VSRLPLEEDL KALSVLINIL PEHISALTKD FPDLHKRLQQ HRLGNQVINK QPFTVTTVNR
MLISRILTCR YLRDDAAVFL ERCCADLFRI FCRQYNVAMV VPPAENDNYN KVFEYMRTYP
HARCDLRYFS RMFHIPEHEM EAGFLSYFAI SIHDCSHMLK MMTAFDLIIQ HGQSFGDIAV
RIGMDTERMI QAIEAYYNIK VAAQRN
|
|---|
| |