| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0046 |
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| Symbol | |
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| ID | 8356143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 56152 |
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| End bp | 56742 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644962191 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003119753 |
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| Protein GI | 256419100 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTAC AGGATCTTTA TTTTTTGTTA TGCAGTTTTG AATCTAAAAT GATGTTATTT
CACGAGGAAG AATTATTATT GTCAGTGAAA AACGGGGATG CAAATGCTTT TGCTTCACTC
TACGAGAAAT ATCGCCCGCA ATTATTGACG GAAGCATACC ATAAGGTACG CAACCAACAT
GAAGCGGAAG ATATGGTACA GGAGATCTTT ACTTCTTTAT GGCAACGACG TAGACAATTG
ACGATCAATA TCTCTCTGAA ACACTATCTG TTCAGAGCCG TACATCTGCA ATATGCCTAT
AAATGCCGAC GCAATGAAGT AGCGCGTAAG TTCGTAACAC ACACCTACTA CACAGCCACG
GATGCTGCCC TTCCTCAAAA TCTGGAGAAC AAGGAACTGG GCCAACAAAT CCGTCAGGCC
GCTACTTATG TGTCAGCGCC TGCCTGCAGA AAAGTATTTG AACTACTTTA TCTGCAGGAC
TGGAGTCATA AAGAAATAGC ACAGGATCTG AACATCCAGC CACAGGTAGT AAAAAACCAG
GCAAGCCGTG CACTGAAAGT GATCCGTACC CGTCTGAGAG AAGTTGTCTG A
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| Protein sequence | MTLQDLYFLL CSFESKMMLF HEEELLLSVK NGDANAFASL YEKYRPQLLT EAYHKVRNQH
EAEDMVQEIF TSLWQRRRQL TINISLKHYL FRAVHLQYAY KCRRNEVARK FVTHTYYTAT
DAALPQNLEN KELGQQIRQA ATYVSAPACR KVFELLYLQD WSHKEIAQDL NIQPQVVKNQ
ASRALKVIRT RLREVV
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