| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0043 |
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| Symbol | |
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| ID | 8356140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 50784 |
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| End bp | 54053 |
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| Gene Length | 3270 bp |
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| Protein Length | 1089 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644962188 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003119750 |
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| Protein GI | 256419097 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACATCT CTACGCCTCG CAGTAACCTG CTAGTCAGGT TTATGTCTGT CTTTTTATTA
TGGTTTTCTT TTTCTGCGTT CTCTGAGATA GATCAGACCG GGAAGCAGAA GGTGACGGTT
ATTGCGAAGA ATGAGACGTT GGAGAGTGTG TTTAAGCAGA TAGAAAAGCA GACGGGACTA
AGATTTATGT ATTCAACTGA TGCCGTTAAT GTAAATGAGA TAGTGAGTGT TGAGTTTGAA
AAAATGATGT TAGATGACGT GTTGAGAGAA ACGCTTGGAA GGAGAGGCAT TAGGTGGGTA
TATCGACAAC ATATAGTCTC TCTTATATCG CTTGATACGC AATTTACGAC GAAACATTCA
ACTAGTGATA AATATGTGAA TGTTTCAGGA AAAATCATAG ATAATAAAGG AAACCCGATA
CCCGGAGCGA CAATATTGAT TAAAGGAAGC AATAAGGGCA CTAAATCAGA TAGTGACGGG
AGCTTTTTGT TGGTGGGGGT AAGTGATAAT AGTATGCTAA TAGTTCGTCA CATAGGATTT
GGATATAAAG AGGTAGAAGT AACTCAGAAA ACGTTGATTA TTCGTTTAGA TGAATTGCCT
GGAGTACTTG ATGAAACTGT AGTAGTTGGG TATGGAATAA TTACGCCAAG ATTTAATACT
GGCAATGTTA TTTCAATAAA GTCCGATGAG ATCGCTAGAA GCCCGGTATC AGATCCTTTA
TTAGCTTTAC AAGGAAAGGT CCCGGGAATG GTTATTACAC AGACTACAGG ACTATCTGGG
GGACAGGTAA AAGTTCAGAT TAGGGGGCAA AATAGTTTGA AAAATGGAAC AATACCGTTA
TTTATAGTAG ATGGAGTACC TTATCAACCT GTTGTTTCTG CTCCTGTTGG AGGAACTTAT
GGAGCCTTGG GAACGGTCAT TTCCGCATTG AATTTTATCA ATCCGAGAGA CATTGAAAGT
ATAGATGTTT TAAAAGACGC TGACGCAACT TCCATTTACG GTGCTAGAGG AGCGAATGGC
GTTGTACTGA TTACCACGAA AAAAGGAAGG ATTGGTGAAA CAAAAATTGA CGTAAGTTTA
AATAGGGGAT TACAAAATCT TCCCAGGAAA AGGAAATTAT TAGATACTCA GCAGTATCTA
GATATGAGAA GAGAGGCATT TAGAAATGAT GATATGGCTC CTTCTTTGCA AAATGCGCCG
GATTTAATTT TATGGGATAC AGCGAGTTAT GTTGATTGGC AAAAGGAATT GTTAGGCCGA
ACAGCCAGCT ATACAGATGG ACAACTTAGT TTTTCTGGAG GGGTAAGCTC TGTTCAGTAT
CTTCTTGGAG GAAATTTTCA CAGAGAAACA ACAATATTTC CAGGAGATTT TTCAAGTAAT
CGAGGAGGTG TCCATTTTAA TATAACAGGT AATTCTCCTG ATCAAAGATT AAGAGCATCT
ATTACAGGAA ACTATACCAT AGACAAAACC AATTTTCCGG GATTTGATTT TGCAACTAAA
ATAAGCTTAC CACCTAACGC TCCTAGTGGG TATAATCTCG ATGGCACTCT TAATTGGGCG
AATTCAACTT GGGATAATCC ATATGCGCAA TTAATGACGA ATATGGTTGA TGGCAAGGTT
AATAACTTGG TTGGAAATAT TGACTTAAGT TACAGAGTTA TTGAAGGACT AGTTTTAAAG
GCAAATTTAG GTTACACAGA AACAAGGAAC AATACATTTT CTGCTTATTT AATTGCTGGG
CTACCTCCTG AGCAAGCTTC GACGGCTACA GCGTCTGGAG CATACACAGA TGTTAAATCC
ACCAACTGGA TTACAGAACC GCAACTTACT TTTCATAGAA GTCTTGGTAA AAGTCAGATA
AATATTCTGT TGGGAGCAAC GTTACTTGGA AGTTCCTCAG ATGGTAAGTT GCTATATACC
GACGGTATTT TACAGGATGC TCTTGTTCGT TATCCTGGTG CGGCAAAGTC ATATACAATA
AGTGGTATAG GACGTAAGTA TAAGTATTTA GCTTTCTTTG GACGATTTGG ATATAACTTA
AGGGATAAAT ATATAATTAA TTTTACGTTG AGAAGAGATG GAAGCAGTCG ATTTGGTCCA
CGAAATCAAT TTTCGAATTT TGGATCATTG GGTATTGGGT GGCTATTTTC TGAGGAGAGT
TTAATTAAAG AAAATTTTTC AATATTGAGT TTTGGAAAGT TAAGAGGAAG CTATGGTATT
ACAGGTAATG ACCAAATTGG AGATTATCAA TATTTAGATC AGTATAAATT TGTGGAAAAT
TTATATCAAG GTGAAAAAGG CTTGCGTGTT CAAGGACTAT ATAATCCTGA TTTTGCGTGG
GAGCGTACAC GTAAGACTGA AATAGCGTTG GAATTAGGTT TTTTGAAGGA TAAAATTCTT
ATAAACTCGA GCTATTATAA TAATTATTCG AATAATCAAC TTTTAAGCTA TGATGTTCCC
ATTATATCAG GAGCCTCTAC ACTTACGGGA AATCTTCCTA TAGCTATTCG TAATAGTGGA
ATCGAACTTG TGCTAACTAG TCAAAATGTT AAATCCCAAA AGATTGAATG GGCAACGTCA
ATTAATTTTT CTAGAAGTCG AAATAAATTA GTGACTGATT ATCAGAATAT TTTGGGCACT
AAGCGGATTG GTAGGCCTTT GTCAGAGATT CTTACATATA AATCACTGGG TGTTAATGAA
GAAACAGGGG CTTATCAATT TGCAAATAGT GAAGGTAAAC CTGTAGATGC GATAGATGCT
GATGGGGGAT ATAGTCTTAT TAATCCAGCT ATTGATTTTT TTGGAGGGAT ACAAAATAAC
ATAAAGATAA AACAATTTCA GATTGATGTT TTTTTCCAGT TTACAAAGCA GGTAGGCAGA
AATAGTGAAT ATGACCCTAA TTGGATCCCT GGCGAAATTA GAAATCAGCC GCAATCAATA
GTTAACAGAT GGCGTAAACC TGGCGATGTT GCTGTTTTTC AAAAAGTTAG TCAAAACCTT
GCTCTGTATG ATAACTATGC ATTCTGGGTT CGTGCAAGTA ATAGTGGATA TGCAGATGCC
TCTTTCCTGA GATGTAAGAA TGTTATGTTA TCATGGTTAA TGCCTGAGAA ATTGCTCAAT
AACTTACATT TAAAGATGTG TAGAATATAC ATTCAAGGCC AAAATTTATT TACTATAACA
AAATATAAAG GATGGGATCC TGAAACTCAG TCCGTAGATG TAATCCCTCC ACTTAGAGTA
TTGAATGCAG GATTTCAGAT GAGTTTTTAA
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| Protein sequence | MYISTPRSNL LVRFMSVFLL WFSFSAFSEI DQTGKQKVTV IAKNETLESV FKQIEKQTGL
RFMYSTDAVN VNEIVSVEFE KMMLDDVLRE TLGRRGIRWV YRQHIVSLIS LDTQFTTKHS
TSDKYVNVSG KIIDNKGNPI PGATILIKGS NKGTKSDSDG SFLLVGVSDN SMLIVRHIGF
GYKEVEVTQK TLIIRLDELP GVLDETVVVG YGIITPRFNT GNVISIKSDE IARSPVSDPL
LALQGKVPGM VITQTTGLSG GQVKVQIRGQ NSLKNGTIPL FIVDGVPYQP VVSAPVGGTY
GALGTVISAL NFINPRDIES IDVLKDADAT SIYGARGANG VVLITTKKGR IGETKIDVSL
NRGLQNLPRK RKLLDTQQYL DMRREAFRND DMAPSLQNAP DLILWDTASY VDWQKELLGR
TASYTDGQLS FSGGVSSVQY LLGGNFHRET TIFPGDFSSN RGGVHFNITG NSPDQRLRAS
ITGNYTIDKT NFPGFDFATK ISLPPNAPSG YNLDGTLNWA NSTWDNPYAQ LMTNMVDGKV
NNLVGNIDLS YRVIEGLVLK ANLGYTETRN NTFSAYLIAG LPPEQASTAT ASGAYTDVKS
TNWITEPQLT FHRSLGKSQI NILLGATLLG SSSDGKLLYT DGILQDALVR YPGAAKSYTI
SGIGRKYKYL AFFGRFGYNL RDKYIINFTL RRDGSSRFGP RNQFSNFGSL GIGWLFSEES
LIKENFSILS FGKLRGSYGI TGNDQIGDYQ YLDQYKFVEN LYQGEKGLRV QGLYNPDFAW
ERTRKTEIAL ELGFLKDKIL INSSYYNNYS NNQLLSYDVP IISGASTLTG NLPIAIRNSG
IELVLTSQNV KSQKIEWATS INFSRSRNKL VTDYQNILGT KRIGRPLSEI LTYKSLGVNE
ETGAYQFANS EGKPVDAIDA DGGYSLINPA IDFFGGIQNN IKIKQFQIDV FFQFTKQVGR
NSEYDPNWIP GEIRNQPQSI VNRWRKPGDV AVFQKVSQNL ALYDNYAFWV RASNSGYADA
SFLRCKNVML SWLMPEKLLN NLHLKMCRIY IQGQNLFTIT KYKGWDPETQ SVDVIPPLRV
LNAGFQMSF
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