Gene Cpin_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0038 
Symbol 
ID8356135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp44607 
End bp45347 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content43% 
IMG OID644962184 
ProductIstB domain protein ATP-binding protein 
Protein accessionYP_003119746 
Protein GI256419093 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGA CACAAACACT TCAACAAATG CAATCACTTC GCCTACAGGG CATGTTCCAG 
GCGTATCAAA CTCAATTAGA CCTACCCATG AATCAACAAC TTGAAGGTCA TGACCTGATT
GCCCATCTGG TACAATCAGA AGAGCAAAAT CGTATTAATG AGAAGACCGC ATATTATCTG
AAGCTGGCCA AGCTGCGTCT GCCTGCAACC ATTGAACAAA TAGATTGTAG TCCCAGACGC
AATTTAAGCA AACAGCAGCT CGCACTACTA AGCGAAGGCC GCTATTTACA GCACGGAGAG
AATGTACTGA TTACAGGCGC AACTGGTTGC GGAAAAAGCC ATCTGGCCTG TGCCTTAGGG
CATCAGGCAT GCCTTCAGGG TTATAAAACA ACTTACTTGA ACATGAACCG CCTTATTGAG
AAGGTTACCT TATCTAAACT TGACGGTTCC TACATTAAAC TGCTTAATCA CCTGGAACGA
CAAACCTTAA TCGTGCTGGA CGACTTTGGC TTAACGCCAA TGACACAGGA AATCCGGCTT
ACTTTGCTGC AACTGCTTGA AGATCGTTAT GGTAAGAAAA GTATCATCGT CACATCACAA
CTACCAGTCT CTAAATGGCA TGAGTACATT AATGATCCAA CGTTAGCTGA TGCTATCCTT
GACAGAATGA CAGCAAATGC ACATCGTATT GAACTAAAGG GAGACTCTAT GAGGAGAAAA
AAGGCATCTG AGAATCAGTA A
 
Protein sequence
MNTTQTLQQM QSLRLQGMFQ AYQTQLDLPM NQQLEGHDLI AHLVQSEEQN RINEKTAYYL 
KLAKLRLPAT IEQIDCSPRR NLSKQQLALL SEGRYLQHGE NVLITGATGC GKSHLACALG
HQACLQGYKT TYLNMNRLIE KVTLSKLDGS YIKLLNHLER QTLIVLDDFG LTPMTQEIRL
TLLQLLEDRY GKKSIIVTSQ LPVSKWHEYI NDPTLADAIL DRMTANAHRI ELKGDSMRRK
KASENQ