Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0029 |
Symbol | |
ID | 8356126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 33443 |
End bp | 34438 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644962177 |
Product | hypothetical protein |
Protein accession | YP_003119739 |
Protein GI | 256419086 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.759197 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGATT GGTGGATTAA ATCGGGGTGC TTCTTAACGG GATACAACTA TAGCATTGTC AGCTCAACAA GTGAAGTTGT TGCAAAAACA GTAAAAAAAT ACACATCCGC ACTAATTATC ATGTGTATCC TATGGGCATT TATTGGTTAC TGTTTTACTA CGCGTTATAT AAAAGGCAAT ACCTGGCAAG CAATAATTGG CGCGCTCATT CTAATCATTT TGGTCATACA GATTGAACGC CAGATCATAC TCGCATTGAA TAAGAACAAA CTCCTCTTTA TATTTAGAGG CACAATAGCA TTAATGATGG CGATTATTGG TTCGATTATT ATAGATCAAA TCCTCTTCAA AGAAGACATC GAACAGAAGA AAATTCTAGT ACTACAAAAC AAAGTTAACG AAGTGTATGG TTTTCGTGCT GCCGAACTTA AAAGGCAAAT CGCAGAAATT GATTCAACTA TTTTCAAGAA AGAATCAGAT GTGAATGTTT TGAACGAAGA TCTTGCAAAG AATCCCACGA CAAAAGTAGT AACCACACAA AGGACAAACA TACCCGTACC GACTACTATG TTGGATTCTA CTGGAACATC GAATATAATT AGAACATTAC CACAAACATC AGTTACCGTC ACTACGATTC CCAATCCCAA ACAAGAGCTA ATTACACCTA TAAATGATCA GATCAAATAT CTTCGTGATC AAAAAAAACT AAAGGATTCA GCTCTGCTCC AACTCAGAGC GAACTTAGAA CAAGATATCA GCTCAAAAGT GGGCTTTTTG GACGAGCTGG ATATCATGAA AAGACTGCTA ACCGATTCCA GCGCAGCGCT AATTGTATGG ATAATATGGT TCTTACTATT ACTAGGATTG GAATTACTAA TTATGTTCAG TAAAATGGGA GAAAAACGTA ATGACTACGA TGCGACAATC CAACATCAAA TGGCACTTCG GCTGAAACGA CTGGAACTAA TGGATAGAAC CACAAACAAA TATTAA
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Protein sequence | MKDWWIKSGC FLTGYNYSIV SSTSEVVAKT VKKYTSALII MCILWAFIGY CFTTRYIKGN TWQAIIGALI LIILVIQIER QIILALNKNK LLFIFRGTIA LMMAIIGSII IDQILFKEDI EQKKILVLQN KVNEVYGFRA AELKRQIAEI DSTIFKKESD VNVLNEDLAK NPTTKVVTTQ RTNIPVPTTM LDSTGTSNII RTLPQTSVTV TTIPNPKQEL ITPINDQIKY LRDQKKLKDS ALLQLRANLE QDISSKVGFL DELDIMKRLL TDSSAALIVW IIWFLLLLGL ELLIMFSKMG EKRNDYDATI QHQMALRLKR LELMDRTTNK Y
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