Gene Cpin_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0028 
Symbol 
ID8356125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp32856 
End bp33431 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content35% 
IMG OID644962176 
Producthypothetical protein 
Protein accessionYP_003119738 
Protein GI256419085 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCA TGAACTTCAA TCGAAACACA CCATCACTCA ATGGTACAAA CTCAGAGGAT 
GTCACAGCAT CAGTCAACAG CCAACATCCT GAAATACCAG AAAATATCTT TATAGATACT
AATCTTACTC CAGCCAAGAC TGGCTTAGAA AGGGAAGAAA AGATCGACAA TAACATTGAC
CTACTTTTTC GGTTTCTAGA CAGAAACCTT GAGAATCAGG GATATGAGGA TGCACTGATT
AACCCTGATA TTACAAATTT AAACGAGAAC ATTGCATCTA TAAAGAATGA TTTACATCGC
ACCATAAAAA AAGTAAATAT ATTCTATGAC AGCTTTATAA GAGAGATAAA CTTTCATATT
GACAGTCGTA GCCGTAGCGG AATGATCGAC ACAGTCGAAG AATTAATTAT GAAAAAACAG
ATTGCAGAGG ATCATGTTCA AAAAATACAA GATATAGAAA TTGATGCAAA GAATGGCCAA
GGGGATAGCC AAGGATTAAT TTTAAGCTAT ACACGTGGAT TCAAAAATGG GCTTGCTGCC
ATCTCACATC ATAATATTAT TCGCAAAAAA CTATAA
 
Protein sequence
MSFMNFNRNT PSLNGTNSED VTASVNSQHP EIPENIFIDT NLTPAKTGLE REEKIDNNID 
LLFRFLDRNL ENQGYEDALI NPDITNLNEN IASIKNDLHR TIKKVNIFYD SFIREINFHI
DSRSRSGMID TVEELIMKKQ IAEDHVQKIQ DIEIDAKNGQ GDSQGLILSY TRGFKNGLAA
ISHHNIIRKK L