| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0022 |
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| Symbol | |
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| ID | 8356119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 26569 |
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| End bp | 28398 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644962170 |
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| Product | glycoside hydrolase family 2 sugar binding |
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| Protein accession | YP_003119732 |
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| Protein GI | 256419079 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGT TTAAAAGCAC GCTTTTGTTT GTTACCCTAT GTTTCCCCTA TTTCCAGATC
GCCCTTGCCA TTGGTGAGGG CGATCGATTT TCGGGTCGCT GGTCTATGCA ACCGGTACCG
GTCCAGACGC GATGGGCAAC AGCCGTCTCT CCCTCCAATG CGCTACCGGA ATATCCACGT
CCACAAATGG TACGCTCTCA GTGGGAGAAT TTAAATGGTC TCTGGGACTA TGCGATTACG
CATTGGGATG CCGGTATGCC GCATAAATTC GATGGAGAGA TACTGGTACC TTTTGCGATT
GAATCAGCCC TCTCTGGTGT GCAGAAACAA TTACTGCCGA CGCAAAGACT CTGGTATAAG
CGGAACATTC GCAAACCTGA TACCCATGGT GGCAAACGCG TATTGCTGCA CTTTGGAGCG
GTCGACTGGC GGGCAGCCGT TTTCCTGAAT GGAAAACTCC TGGGGAGGCA TATGGGAGGC
TATCAACATT TCTCTTTTGA TATTACAGCG TCTTTGCAGG AGGGAGATAA TGAGCTGGTC
GTCACCGTGC TAGATCCTTC CAATCTCGGT CCTAATCCCT GTGGGAAACA GAGCCTGCGG
CCCAGGAAGA TCTTATATAC CGCCGTCAGC GGCATCTGGC AAACGGTCTG GCTGGAAACG
GTTCCACCTA CTTATATCAC AGACATTTAT TCCACTCCGG ATATCGATGC CCATTGCCTG
AATCTGCGGG TCAATACGTC GGATACTACC GGCGTTACTG TTGACGTCAC AGCTTATGCC
GGTATTGTCG TTGCTGGTCA TACGCAAGGC CGGGCAGGCA GTATGCTGGA CCTGGGTGTT
CCTTATGCAC GTCTCTGGAG TCCGGCAGAT CCTTTTCTTT ATCATATGAC TGTTCGTCTG
TTACGGGATG GTCGTGTCAT TGATTCGGTC AAGAGCTATT TCGGGATGCG GAAAATTAAT
GTGCAGGCTG ATAGTAGCGG TATGCCCCGG TTATTCCTCA ATAACAAATA TACCTTTCAT
CTGGGCGTAC TGGATCAGGG GTATTGGCCG GAAGGGCTGT ATACCGCGCC GACTGATGCT
GCTTTATTAT ACGATATCAA AGCCATTAAA GATATGGGCT TCAATACCAT CCGGAAACAT
GTCAAACTGG AACCCGACCG CTGGTATTAC TATGCGGATA GTCTGGGGAT GTTGGTATGG
CAGGATATGG TTCCTTGTGC GGATGACGAT TACTACGCCA CCTCTCAATT CGAGCAGGAA
AATGCGGAGA ACCTGCGTCA GCTGCATAAC TTCCCTTCCA TCGTTATGTG GATCCTGTTT
AATGAAGGAT GGGGGAAATA CAATCAACAA ACACTCACAG AGTCGATGAA ACAAAGTGAT
CCTTCCCGTA TTATCAATGG TCATTCCGGG GAAAACCTGG ATGAATACAG CGATACACCC
GTCAGTGATC GTTGGATCAG TAGTGAGGTG GCAGATGTGC ATTATTATCC AGGGCCTTAT
ATCTCGCCGG CGCTGCCTGG CAAAGCCAGG GTACTAGGAG AATGGGGAGG CGTACGTGTG
CCGACGCCAG GACATCAATG GGCGCCTGCG ACCAGCTGGG GTTATATACA AGTAACGGCT
GACCGGTTTG CACAGCGGTA TGCGTATATG ATGGAGCGGC TGAAGAAGTA TGAGGTGCAG
GGATTGTCAG GGGCTATCTA TACCCAGCCG TATGATGTAG AGTCGGAGGA GAATGGTTTT
ATGACGTATG ACAGGGCGGT GATGAAGATA AAGGCGGAAG AGATGCGGAA GGTGAATCAG
ACGCTGACGC ATCAAACAGC CGGGCAGTAA
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| Protein sequence | MKPFKSTLLF VTLCFPYFQI ALAIGEGDRF SGRWSMQPVP VQTRWATAVS PSNALPEYPR
PQMVRSQWEN LNGLWDYAIT HWDAGMPHKF DGEILVPFAI ESALSGVQKQ LLPTQRLWYK
RNIRKPDTHG GKRVLLHFGA VDWRAAVFLN GKLLGRHMGG YQHFSFDITA SLQEGDNELV
VTVLDPSNLG PNPCGKQSLR PRKILYTAVS GIWQTVWLET VPPTYITDIY STPDIDAHCL
NLRVNTSDTT GVTVDVTAYA GIVVAGHTQG RAGSMLDLGV PYARLWSPAD PFLYHMTVRL
LRDGRVIDSV KSYFGMRKIN VQADSSGMPR LFLNNKYTFH LGVLDQGYWP EGLYTAPTDA
ALLYDIKAIK DMGFNTIRKH VKLEPDRWYY YADSLGMLVW QDMVPCADDD YYATSQFEQE
NAENLRQLHN FPSIVMWILF NEGWGKYNQQ TLTESMKQSD PSRIINGHSG ENLDEYSDTP
VSDRWISSEV ADVHYYPGPY ISPALPGKAR VLGEWGGVRV PTPGHQWAPA TSWGYIQVTA
DRFAQRYAYM MERLKKYEVQ GLSGAIYTQP YDVESEENGF MTYDRAVMKI KAEEMRKVNQ
TLTHQTAGQ
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