Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0012 |
Symbol | |
ID | 8356109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 15461 |
End bp | 16135 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644962160 |
Product | hypothetical protein |
Protein accession | YP_003119722 |
Protein GI | 256419069 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTAG ACCTATTTCA GTATTTTCAG TTGTTAAGCC TCCTTGTAGC AATCATCTGC TACAAGGGGC TTTCTCATTG CCGGATTGTC CTGTTTATCC CTTTGCTATT GTTAACCAAC ATAGTAGAAA TAGTCGGCAC CAATTATCGT TTGTTAGGCT GGACACGCAG TGACTTTATC TATAACTGGT ACATCCTGAT GTCTACACCA CTGACGCTCT ATCTGTATGG TATGATGCTA CGCCTCCGGC AAAATGAAAA GCCTATTTAT ATCATTATTA GCCTGCTTTC CATACTTTTT ATTTTTATCA ACTTTTTCTT CCTGCAAGGT CGTCAACAGT TCAATAATAT TTCTGTTATT CTGATTGAAA TCCTTAATAT TGTTTTCTCT TGCTTTGTGT TACTCAGGTT AGCGCTTCAT GGAGATATAC AATCAGGTAT GTTCAAAGAC CCTTATTCCT GGATCAGCGC CGCTAATCTT CTGTTTGGCC TCATTACGCT TGTATTGCTC GGATTGCAGC AATATATAAG AAGTAATAAT ATTGTGATTG GTAACACCAG CCTGTATCGT GCGATTTTGC CTGTAGTTAA TATTATTCTC TATTCTTCTT ATTGCGTCGC ATTTGTATTA TGCAGGATTC GAATCAACAG ATCGTTATTA TCATCATCGC AGTAA
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Protein sequence | MTLDLFQYFQ LLSLLVAIIC YKGLSHCRIV LFIPLLLLTN IVEIVGTNYR LLGWTRSDFI YNWYILMSTP LTLYLYGMML RLRQNEKPIY IIISLLSILF IFINFFFLQG RQQFNNISVI LIEILNIVFS CFVLLRLALH GDIQSGMFKD PYSWISAANL LFGLITLVLL GLQQYIRSNN IVIGNTSLYR AILPVVNIIL YSSYCVAFVL CRIRINRSLL SSSQ
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