Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0009 |
Symbol | |
ID | 8356106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 12971 |
End bp | 14029 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644962157 |
Product | Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit-like protein |
Protein accession | YP_003119719 |
Protein GI | 256419066 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGAC GGCCTTCTCT TCCTGTTATT GAATCTATCC GCAATCGACC GGTGATGTAC CTGGGATCGG TGAACAGTTA TGGCATCAGA CGTCTGATGA AAATGCTGAT CACTGATTAT CTGGAAGATG TAACAGGCTT ATCTACCGTA GAGATCACGT TCAATCCTGA TAGTTTTGTG AGTGTGGTTC TTTCAGGTAT GCCGGTGGAT GAATTATTAC ATGAGGTCGC CTTTTTGCAG GAAATCTCCT CCGGAAAGAA TTTTAAAATT GCATTACTCA TCGCCATCAG CCGCTTTGTG CTGGTACGTA TTGTGGTAAA TGGAGAGATA CATTCTATCA CCTCTCATGC CGGCATATAC GAAGTAGAAA TGCATCCGGC TGACGGAGAG CCGAATGGTA TTAAAGTGGA CTTTCAGTTA GAAGAGCAGA TTTTCAAGCA TAACCAGGTG GCTTATATTC CTATGAATAT CATGCTGCAG CAGCTGGCTT ATCTGAACCC CGGACTGAAA ATAATCAGTG TGGATAACCG GGGGGAATTA CAGCGGAATG TGTTTTATTT CAGAACGGGG ATCTCTGAAT TATTCAATGA CCTGCTGGAT AAACACGATT ATGGCAGTAT GAATGCCTGG TTGCCGATTG AACTGAAAAC AGCGATCAAC GGTTATATCT TCCATGTTAT TCTTAGATAT CATCATATTT ATACGGTTTA TCCTGCACCA TATATACGCT CCTTCGCTAA TAATGAAGCA ACTAAAGGAC ACGGCTCCCT GGTGGAAGGT GTGTTAAAAG GGCTGGAGGA TGCTTTTGTG GAAGTGGGTG AAAAAGAAGG CGTGGAACTG AAAGTGAACA AAAAGCGGAT CGGAAAAATG CTCGTGCTGT TTGCTGCTGT AAAGGGGGAA CCGCTGACGT ATGATGGTCG CAGTAAGGAT AAACTGGATA TGCCGGGGTT GAAAAAAGAT GTGCGGAAGT TTGTGAAAAG AGGGGTGTTG AAGTACCTGG AAAGCAATTC CGGGGACAGA AGAAGAGTGT TGGAAAAGTT TATAAGGAAA GACAGTTAG
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Protein sequence | MNGRPSLPVI ESIRNRPVMY LGSVNSYGIR RLMKMLITDY LEDVTGLSTV EITFNPDSFV SVVLSGMPVD ELLHEVAFLQ EISSGKNFKI ALLIAISRFV LVRIVVNGEI HSITSHAGIY EVEMHPADGE PNGIKVDFQL EEQIFKHNQV AYIPMNIMLQ QLAYLNPGLK IISVDNRGEL QRNVFYFRTG ISELFNDLLD KHDYGSMNAW LPIELKTAIN GYIFHVILRY HHIYTVYPAP YIRSFANNEA TKGHGSLVEG VLKGLEDAFV EVGEKEGVEL KVNKKRIGKM LVLFAAVKGE PLTYDGRSKD KLDMPGLKKD VRKFVKRGVL KYLESNSGDR RRVLEKFIRK DS
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