Gene Cpin_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0009 
Symbol 
ID8356106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp12971 
End bp14029 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content44% 
IMG OID644962157 
ProductType IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit-like protein 
Protein accessionYP_003119719 
Protein GI256419066 
COG category[L] Replication, recombination and repair 
COG ID[COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGAC GGCCTTCTCT TCCTGTTATT GAATCTATCC GCAATCGACC GGTGATGTAC 
CTGGGATCGG TGAACAGTTA TGGCATCAGA CGTCTGATGA AAATGCTGAT CACTGATTAT
CTGGAAGATG TAACAGGCTT ATCTACCGTA GAGATCACGT TCAATCCTGA TAGTTTTGTG
AGTGTGGTTC TTTCAGGTAT GCCGGTGGAT GAATTATTAC ATGAGGTCGC CTTTTTGCAG
GAAATCTCCT CCGGAAAGAA TTTTAAAATT GCATTACTCA TCGCCATCAG CCGCTTTGTG
CTGGTACGTA TTGTGGTAAA TGGAGAGATA CATTCTATCA CCTCTCATGC CGGCATATAC
GAAGTAGAAA TGCATCCGGC TGACGGAGAG CCGAATGGTA TTAAAGTGGA CTTTCAGTTA
GAAGAGCAGA TTTTCAAGCA TAACCAGGTG GCTTATATTC CTATGAATAT CATGCTGCAG
CAGCTGGCTT ATCTGAACCC CGGACTGAAA ATAATCAGTG TGGATAACCG GGGGGAATTA
CAGCGGAATG TGTTTTATTT CAGAACGGGG ATCTCTGAAT TATTCAATGA CCTGCTGGAT
AAACACGATT ATGGCAGTAT GAATGCCTGG TTGCCGATTG AACTGAAAAC AGCGATCAAC
GGTTATATCT TCCATGTTAT TCTTAGATAT CATCATATTT ATACGGTTTA TCCTGCACCA
TATATACGCT CCTTCGCTAA TAATGAAGCA ACTAAAGGAC ACGGCTCCCT GGTGGAAGGT
GTGTTAAAAG GGCTGGAGGA TGCTTTTGTG GAAGTGGGTG AAAAAGAAGG CGTGGAACTG
AAAGTGAACA AAAAGCGGAT CGGAAAAATG CTCGTGCTGT TTGCTGCTGT AAAGGGGGAA
CCGCTGACGT ATGATGGTCG CAGTAAGGAT AAACTGGATA TGCCGGGGTT GAAAAAAGAT
GTGCGGAAGT TTGTGAAAAG AGGGGTGTTG AAGTACCTGG AAAGCAATTC CGGGGACAGA
AGAAGAGTGT TGGAAAAGTT TATAAGGAAA GACAGTTAG
 
Protein sequence
MNGRPSLPVI ESIRNRPVMY LGSVNSYGIR RLMKMLITDY LEDVTGLSTV EITFNPDSFV 
SVVLSGMPVD ELLHEVAFLQ EISSGKNFKI ALLIAISRFV LVRIVVNGEI HSITSHAGIY
EVEMHPADGE PNGIKVDFQL EEQIFKHNQV AYIPMNIMLQ QLAYLNPGLK IISVDNRGEL
QRNVFYFRTG ISELFNDLLD KHDYGSMNAW LPIELKTAIN GYIFHVILRY HHIYTVYPAP
YIRSFANNEA TKGHGSLVEG VLKGLEDAFV EVGEKEGVEL KVNKKRIGKM LVLFAAVKGE
PLTYDGRSKD KLDMPGLKKD VRKFVKRGVL KYLESNSGDR RRVLEKFIRK DS