| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0002 |
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| Symbol | |
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| ID | 8356099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1698 |
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| End bp | 2234 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644962150 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003119712 |
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| Protein GI | 256419059 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCACAAG AAGGTCAACA CACTTTATGG AGTGCTATCA GGAAAGGCGA TGAAACCGCC
TTCCGCCAGT TATTCGAAGA ATGCTGGGAG CCCTTGTTCA CCTATGCCAG TCGTATCACC
ATCGATCATT CTCTGGCCCA GGACAGTGTA CAAAGCCTAT TTATACATAT CTGGGAAAAA
CGTGACAGCC TTCCCGATGT TACTGCCATC CTGCCATATC TGCGCAGCGC ACTTAAAAAC
AGATTGCTGA ACGCCCTCCG TGATGAACAT GTCTATCAGA AACACGTAGA CCTCTTCACA
CAGGTCGTCG ATACCAATTC CCCTTCTTCC GCAGAACCGT TACACCTCAA AGAAACAGAA
CAACAGTTGT TACAGTCCAT CAACCGCCTC CCCGGCAAAA TGAAAGATGT CTTCTATCTG
CATCGTATAG AAGATCTCTC CGTTGCCGAG ATCGCCTGTA AACTGGGTAC CTCCCCACAA
ACAATAAGAA ATCAGATCAG CACCGCCATA CAAAGGTTGA AAACAACCTT TGTTTAA
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| Protein sequence | MPQEGQHTLW SAIRKGDETA FRQLFEECWE PLFTYASRIT IDHSLAQDSV QSLFIHIWEK
RDSLPDVTAI LPYLRSALKN RLLNALRDEH VYQKHVDLFT QVVDTNSPSS AEPLHLKETE
QQLLQSINRL PGKMKDVFYL HRIEDLSVAE IACKLGTSPQ TIRNQISTAI QRLKTTFV
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