Gene Caci_8910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8910 
Symbol 
ID8340303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10320425 
End bp10321219 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content75% 
IMG OID644962000 
Productbeta-lactamase domain protein 
Protein accessionYP_003119564 
Protein GI256398000 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGG GCGTCCGGCC CGAGGCCGGG ACCGAGCGCG CGACGCTGAT CCTGGCTCCC 
AACGCCGACC CGATGACCCT GGACGGCACC AACACCTGGC TGCTCGCCGA GCCCGGCGCA
CGCGGCGCGG TGGTCGTCGA TCCGGGACCG CTGGACGAGG GCCACCTCCA GTTGGTGCTG
GCCACCGCCG AGGAGCGCGA GCTGCGGATC GGGCTGATCC TGCTCACCCA CGGGCACTTC
GACCACTCCG AGGGCGCGCC CCGGCTGGCC GAGCTGACCG GCGCGCCGGT GCGCGCGCTC
GACCCGCGCT TCCGGCTCGG CGAGGAAGGG CTGGCCGGGG GAGACGTCGT GGACGTGGAC
GGGCTGCGCC TGGACGTGGT CGCCACGCCC GGGCACAGCG GCGACAGCAT GTGCTTCGTG
CTGCCCGACG ACCGCGCGGT CCTGACCGGC GACACCATCC TGGGCCGGGG CACGACGGTG
GTCGCCCATC CCGACGGGCG GCTGGGGGAC TACCTCGACT CGCTGCGCCG GCTGCGCGAT
CTGACGGCCG CGCACGAGGT GGAGACCGTC CTGCCGGGGC ACGGCCCGGT CCCGGCCGAC
GCGCTGGGCG TCGTCGAGTT CTACCTCGAG CACCGCCGGC AGCGGCTGGA GCAGGTGCGG
GCGGCCGTGG CCGCCGGCGA CGAGAGCGCC GCCGACGTGG TGGCCAGGGT GTACGCCGAC
GTGGATCCGG CGGTGCGCTT CGCCGCTGAG ATGTCGGTGC GCGCGCAGCT GGAGTATCTC
CACGACGGGG TGTGA
 
Protein sequence
MTPGVRPEAG TERATLILAP NADPMTLDGT NTWLLAEPGA RGAVVVDPGP LDEGHLQLVL 
ATAEERELRI GLILLTHGHF DHSEGAPRLA ELTGAPVRAL DPRFRLGEEG LAGGDVVDVD
GLRLDVVATP GHSGDSMCFV LPDDRAVLTG DTILGRGTTV VAHPDGRLGD YLDSLRRLRD
LTAAHEVETV LPGHGPVPAD ALGVVEFYLE HRRQRLEQVR AAVAAGDESA ADVVARVYAD
VDPAVRFAAE MSVRAQLEYL HDGV