Gene Caci_8874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8874 
Symbol 
ID8340267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10285768 
End bp10286517 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content69% 
IMG OID644961964 
Producttranscriptional regulator, MerR family 
Protein accessionYP_003119528 
Protein GI256397964 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACCA TCAGCCAGCT CGCCGACTAC GTCGGGGTGA CGGTACGGGC CGTGCGGCAC 
TACCACCAGC GCGGTCTGCT GCCCGAGCCG GACCGGGACC ACTCGGGCTA CCGCCGCTAT
GACGCGCAGG CGGTGATCGA CCTGATCCGT ATCAAAACCC TGGCCGAAGC CGGAGTGCCG
CTGGCCCGGA TCGAGGAGCT GCTGGCCGCC GACGCCGAGC AGTTCACCGA CGCGGTGGCC
GAGATCGACC GCTCGATGCA GGACCAGATC CGCGAGCTGA AAGAGCGCCG CCGCCGGGTG
GCCCAACTGG CCTCCGGCGA GCGCCTGTTC CTCCCGACCG AGATCGCCGA GTACATCGAG
GAGCTGCGCG CCGTCGGGGT CAGCGACCGG GGAGTGCTGA TGGAACGCGA CGGCTGGGTG
ATCCTCGCCG CGGCGTATCC GGAGCTGGCG CCTCGCTGGA TCGCCCACAA GCGGGCCGAC
CTGGCGGACC CCGAGTACCG GGACTTCTAC GTGACCTACG ACCAGGCGCA CGACTGGCAG
GTGGACGATC CCCGCCTCGA AGCGCTCGCC GACACCATGG CCGAGCGCTT CGGCAAGCAG
CTCGCCGAAG CCGGGGACCA AGCCGACGAA CTGCGGATGG AGAAAGTGCT GTCCGCGGAG
GAGCAGAAGC TGTTCGCGGA GTACGTCAAC GACTACTCGC CGGCCTGGGT CCGCTTGAAT
GAGATGGTCG CCAAGCGCAT CGCGAGGTAG
 
Protein sequence
MLTISQLADY VGVTVRAVRH YHQRGLLPEP DRDHSGYRRY DAQAVIDLIR IKTLAEAGVP 
LARIEELLAA DAEQFTDAVA EIDRSMQDQI RELKERRRRV AQLASGERLF LPTEIAEYIE
ELRAVGVSDR GVLMERDGWV ILAAAYPELA PRWIAHKRAD LADPEYRDFY VTYDQAHDWQ
VDDPRLEALA DTMAERFGKQ LAEAGDQADE LRMEKVLSAE EQKLFAEYVN DYSPAWVRLN
EMVAKRIAR