Gene Caci_8858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8858 
Symbol 
ID8340251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10271322 
End bp10272221 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content72% 
IMG OID644961948 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003119512 
Protein GI256397948 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGATT CCGATCCGAT CCGCCTGGCC GGCCCGTGGA CGCACCGCGA CATCACCGCG 
AACGGCGCCC GCTTCCACGT CGCCGAGATG GGCGAGGGCC CGCTGGTGCT GTTCCTGCAC
GGCTTCCCCG AGTTCTGGTG GTCCTGGCGC CATCAGCTCC CGGCCGTGGC CGACGCCGGT
TTCCACGCCG TGGCCATGGA CCTGCGCGGC TACGGCGGCA GCGACAAGAC CCCGCGCGGC
TACGACCCGC TGACCCTGAC CATGGACGTC ACCGGGGTCA TCCGCGCCCT GGGCCAGTCC
AACGCCACGC TCGTCGGGCA CGACTGGGGC GCGTTCCTGG GCTGGACCGC GGCGGTCTTC
CGACCGGCGG CGGTGAACCG GTTGGCCGTC ACCGGTTCGG CCCATCCGCG CCGGCTGCGC
CAGGCACTGC TGACCGACCC CAAGCAGATC TCCTCGGCGC GCTTCATGTG GTCCGCGCAG
CGGCCGTGGG CGCCGGAGAA GGCGCTGACG CGCGACGCGG CGATGCTGGT CGAGCAGCTG
CTCGCGGAGT GGGGCGCGAC CGGCTGGCCG GAGCTGGACG TGGCGCAGCG CTACCGCGAC
GCGATGCTCG TGCCCGGCGC CGCGCACTCC TCGCTGGAGT ACTACCGCTG GCTCATCAGG
TCCCTGGTCC GCCCCGACGG GATGCGGTAC GCGCAGCGGA TGCGTACCGA GGTGCGGGTT
CCGGTGCTCC ATCTGCAGGG CGAGTTGGAC AGTGCCCTGC TGCCGCACGT CGCCCGCGGC
TCGGGACGCT ACGTCACTGC CGCGTATCGC TGGCGGATGA TGGAAGGCAT CGGGCACTTC
CCGCACGAGG AGGCGCCGAT GCGCTTCAAC GGCGAGCTGA TCGACTGGCT CAAGAGCTGA
 
Protein sequence
MQDSDPIRLA GPWTHRDITA NGARFHVAEM GEGPLVLFLH GFPEFWWSWR HQLPAVADAG 
FHAVAMDLRG YGGSDKTPRG YDPLTLTMDV TGVIRALGQS NATLVGHDWG AFLGWTAAVF
RPAAVNRLAV TGSAHPRRLR QALLTDPKQI SSARFMWSAQ RPWAPEKALT RDAAMLVEQL
LAEWGATGWP ELDVAQRYRD AMLVPGAAHS SLEYYRWLIR SLVRPDGMRY AQRMRTEVRV
PVLHLQGELD SALLPHVARG SGRYVTAAYR WRMMEGIGHF PHEEAPMRFN GELIDWLKS