| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8848 |
|---|
| Symbol | |
|---|
| ID | 8340241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 10260291 |
|---|
| End bp | 10261916 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644961938 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_003119502 |
|---|
| Protein GI | 256397938 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCGA CCATGCAGGA GACCCCGCTA GGAATCCCGA CGCTCCTGAG GTTCGCCTCG
ACCGTCTATT CCGGCTCCCA GGTGCACACC GTCACCGCCG ACGGCCTGCG CACCGCGAGC
TTCGCCGAGG TCGGCGCGCG CACCGCGCAG CTCGCGCACG CCCTGCACGA CGACCTGGGG
ATCCGCGGCG ACCAGCGGGT CGCGACCTTC ATGTGGAACA ACCAGGAGCA CCTGGAGGCG
TACTTCGCCG TCCCGTCCAT GGGCGCCGTG CTGCACACCC TGAACATCCG GCTCTACCCG
GATCAGGTCA CGTACATCGC CAACCACGCC GAGGACAAGG TGGTGCTCGT CGACGGCAGC
CTGATCCCGC TGCTGGCCCG GGTGCTGCCG GGGTTCGAGA CCGTCGAGCA CGTCGTCGTG
GTCGGCGCGG GCGATCCGGC GCCGCTGGAG GCGGCGGGCA AGCAGATCCA CCGGTACGAG
GACCTGCTGG CCGGCAAACC GACGACCTAT GACTGGCCGG AGTTCGTCGA GACCGACGCC
GCCGCGATGT GCTACACCTC CGGCACCACC GGCAACCCCA AGGGCGTCGT CTACAGCCAC
CGCTCGATCT ACCTGCACTC GATGCAGGTG GCCATGCCGC AGTCCTTCCA GCTCACCGAG
GCCAACCAGG TCCTGACCAT CGTGCCGATG TTCCACGCGA TGGCCTGGGG CATCCCCTAC
GCGGCGCTGA TGAGCGGCGC GAGCCTGGTC ATGCCGGACC GTTTCCTGCA GGCGCCGGCG
CTGGTGCGGG CGATCAACGA GGCGAAGGCG GACTTCGCCG GCGCGGTGCC GACGATCTGG
GCCGACGTGC TGAACCACCT GGACGCCACC GGCGAGAAGA TCCCGACGCT GCAGCGCGCG
GTGGTCGGCG GCTCGGCGGT GCCGCCGGCG CTGATGCAGG CCTTCGAAGA GCGCTACGGG
ATGCGCATCA TCCACGCCTG GGGGATGACC GAGACCTCGC CGCTGGGCTG CGTCTCCCAG
CCGCCGGCCG GCACCGAGGG CGAGCTGGCC TGGTCCTACC GCGTGACCCA GGGCCGTTTC
CCGGCCGGGG TGCAGGCGCG GCTGGCCGGC CCGGACGGCT CGATCGTGCC CAACGACGGC
GAGGCGGTCG GCGAGTTGGA GGTGCGCGGA CCGTGGATCG CCGCGTCCTA CTACCGCGGC
GAGGACCCCG AGCGCTTCCG CGACGGCTGG CTGCGCACCG GCGACGTCGG CACGATCACC
CCCGACGGCT TCCTGACGCT GACCGACCGG GAGAAGGACG TCATCAAGTC CGGCGGCGAG
TGGATCTCCT CGGTGGAGTT GGAGAACCAC TTGATGGCGC ACCCCGCCGT GGCCGAGGCG
ACCGTGGTCG GCGTCCCGGA CCCGCGCTGG CAGGAGCGTC CCCTGGCCGC GGTGGTGCTG
CGCGAGGGCG CCGGGGCGAC ACCGGAGGAA CTGCGCGAGT ACCTGTCCGG GCTCATCCCG
AAGTGGCAAC TGCCCGAGCG GTGGACCTTC CTGGCGTCGG TCCCGAAGAC CTCGGTCGGC
AAGTTCGACA AGAAGGAAGT GCGCCGAGCG TACGCAGCCG GTGAACTTGA GGTCACAGTG
TTGTGA
|
|---|
| Protein sequence | MRSTMQETPL GIPTLLRFAS TVYSGSQVHT VTADGLRTAS FAEVGARTAQ LAHALHDDLG
IRGDQRVATF MWNNQEHLEA YFAVPSMGAV LHTLNIRLYP DQVTYIANHA EDKVVLVDGS
LIPLLARVLP GFETVEHVVV VGAGDPAPLE AAGKQIHRYE DLLAGKPTTY DWPEFVETDA
AAMCYTSGTT GNPKGVVYSH RSIYLHSMQV AMPQSFQLTE ANQVLTIVPM FHAMAWGIPY
AALMSGASLV MPDRFLQAPA LVRAINEAKA DFAGAVPTIW ADVLNHLDAT GEKIPTLQRA
VVGGSAVPPA LMQAFEERYG MRIIHAWGMT ETSPLGCVSQ PPAGTEGELA WSYRVTQGRF
PAGVQARLAG PDGSIVPNDG EAVGELEVRG PWIAASYYRG EDPERFRDGW LRTGDVGTIT
PDGFLTLTDR EKDVIKSGGE WISSVELENH LMAHPAVAEA TVVGVPDPRW QERPLAAVVL
REGAGATPEE LREYLSGLIP KWQLPERWTF LASVPKTSVG KFDKKEVRRA YAAGELEVTV
L
|
|---|
| |