| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8813 |
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| Symbol | |
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| ID | 8340206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 10217265 |
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| End bp | 10219070 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644961903 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_003119467 |
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| Protein GI | 256397903 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0249011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCTG TCAATGATGT GTCCGCATCG TCTGAATCCA CCGAATCATC CGATTCCGCT
GGTACCTCTG ATTCCTCTGG TTCCTCAGCT TCGAGCAAGA CCTACCTGCC CTCCGCCGTG
CGCCCCGAGC TGCGCGTGCC GATGCGCCAG ATCGCGCTGA CCAACGGCGA CTCGGTCGTC
CTGTACGACA CCTCCGGTCC CTACACCGAC CCCGAGGTGC GCACCGACGT CCGCTTCGGC
CTGCCGGCGC TGCGCGCTCC GTGGATCGCC GAGCGCGGCG ACACCGCGGA GTACGACGGC
CGGACCTGGC AGCCGACCGA CGACGGGCTG AAGTCGGCCG ACCTGCGCAA CCTCGACGCC
GTGTTCTCCG GTGGACGCAA GCCGGTGCGC GGGACGGAGG AGCGGGGCGC GGTCACGCAG
CTCGCCTATG CCCGGCGCGG CCTCGTCACC GCCGAGATGG AGTACATCGC GGTGCGGGAG
GGGGTCACCG CGGAGTTCGT GCGGGACGAG GTCGCGCGGG GGCGGGCGGT CATCCCGGCC
AACGTCAACC ACCCCGAGGC CGAGCCGATG ATCATCGGCC GCCACTTCCT GACCAAGGTG
AACGCCAACA TCGGCAACTC CTCGGTCGCC TCCTCGATCG AGGAGGAGGT GGACAAGATG
GTGTGGGCCA CGCGCTGGGG CGCCGCCACC GTGATGGACC TGTCCACCGG CCGGAACATT
CACACCACCC GCGAATGGAT CCTGCGCAAC AGCCCGGTCC CGATCGGCAC CGTGCCGATC
TACCAGGCGC TGGAGAAGGT CAACGGCAAG GCCGAGGACC TCACCTGGGA GGTGTTTCGC
GACACCGTGA TCGAGCAGTG CGAGCAGGGC GTGGACTACA TGACGATCCA CGCCGGCGTG
CTGCTGCGCT ACGTCCCGCT GACCGCCAAC CGCAAGACCG GCATCGTCTC GCGCGGCGGC
TCGATCATGG CCGCCTGGTG CCTGGCGCAC CACGAGGAGA ACTTCCTCTA CACGAACTTC
AGGGAACTGA CGCAGATCCT GGCGCGCTAC GACGTCACCT ACTCCCTCGG CGACGGCCTG
CGCCCCGGCT CCATCTATGA CGCCAACGAC GCGGCCCAGT TCGCCGAACT GACCACCCTC
GGCGAACTGT CGAAGATCGC CCGCGAGCTC GGCGTCCAGG TGATGATCGA GGGCCCGGGC
CACGTCCCGA TGCACAAGAT CAAGGAGAAC GTCGAGCTCC AGATGGAGCT CTGCGACGAG
GCGCCCTTCT ATACCCTCGG CCCGCTCACC ACCGACATCG CCCCCGGCTA CGACCACATC
ACCTCCGCCA TCGGCGCGGC GATGATCGGC TGGTACGGCA CCGCGATGCT CTGCTACGTG
ACGCCCAAGG AACACCTGGG CCTGCCCAAC CGCGACGACG TCAAGCAAGG CCTGATCGCC
TACAAGATCG CCGCCCACGC CTCCGACCTC GCCAAGGGCC ACGAAGGCGC CCAGCGCTGG
GACGACGCAC TGTCCGACGC CCGTTTCGAA TTCCGCTGGG AAGACCAGTT CAACCTGGCC
CTGGACCCCG ACACCGCCCG CGCCTACCAC GACGAGACCC TGCCGGCCGC CCCCGCGAAG
ACCGCGCACT TCTGCTCCAT GTGCGGCCCG CACTTCTGCT CCATGCAGAT CAGCCGCAAC
ATCGCGGAGC AATACGGCGA CCAGATGGCC GCCACCGACG ACGGCGAGAT CAAGGCCGGC
ATGGACGCGA AGTCCGCAGA GTTCCTCGCC TCCGGCGCGC AGGTCTACCT GCCTCTCGCG
GACTGA
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| Protein sequence | MTAVNDVSAS SESTESSDSA GTSDSSGSSA SSKTYLPSAV RPELRVPMRQ IALTNGDSVV
LYDTSGPYTD PEVRTDVRFG LPALRAPWIA ERGDTAEYDG RTWQPTDDGL KSADLRNLDA
VFSGGRKPVR GTEERGAVTQ LAYARRGLVT AEMEYIAVRE GVTAEFVRDE VARGRAVIPA
NVNHPEAEPM IIGRHFLTKV NANIGNSSVA SSIEEEVDKM VWATRWGAAT VMDLSTGRNI
HTTREWILRN SPVPIGTVPI YQALEKVNGK AEDLTWEVFR DTVIEQCEQG VDYMTIHAGV
LLRYVPLTAN RKTGIVSRGG SIMAAWCLAH HEENFLYTNF RELTQILARY DVTYSLGDGL
RPGSIYDAND AAQFAELTTL GELSKIAREL GVQVMIEGPG HVPMHKIKEN VELQMELCDE
APFYTLGPLT TDIAPGYDHI TSAIGAAMIG WYGTAMLCYV TPKEHLGLPN RDDVKQGLIA
YKIAAHASDL AKGHEGAQRW DDALSDARFE FRWEDQFNLA LDPDTARAYH DETLPAAPAK
TAHFCSMCGP HFCSMQISRN IAEQYGDQMA ATDDGEIKAG MDAKSAEFLA SGAQVYLPLA
D
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