Gene Caci_8802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8802 
Symbol 
ID8340195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10205967 
End bp10207184 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content69% 
IMG OID644961892 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003119456 
Protein GI256397892 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.953446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCCG ACTTCCCCAA GTTCTGGTTC GGCGAGACGG TGTCGCTGCT CGGGACACAG 
GTGTCGAACC TGGCGCTGCC GCTGACCGCG ATATCGACGT TCCACGCGTC CAACGCCGAG
GTCGGCGTCC TGCGCTTCCT GCAACTCGCG CCCTACATCG GTTTCGCGCT GGTCTTCGGG
GCGTGGGCGG ATCGCGTCCG GCGCCGACAC GTCATGATCG CGACGAATCT GGTCCGGATG
GCGCTGGTGG GCGTCGTTCC CGCCCTCGCC GCGCGGCATG AGTTGTCCAT GCCGCTGCTG
CTCGTCATCG CGTGCGCGGT CGGCGTCGCG TCGGTGATGT TCGACGTCAG CTGGATGCCC
TACGCGCCGA CCCTCGTGGA CGGCGACGAG CGGCGCTATG TCGAGATCAG CGCGAAGATG
GGCATGAGTT CTTCGGCTTC GGACGTCGCG GGTCCCGGTC TGGCCGGGCT GCTCGTGTCG
GTGCTGAGCG CGCCGACCGC GCTCGTCGTG GACGCGTGCT CGTACGCGGT GTCGGTCACC
TCGCTGTTGG CGATCCGCAA GCAGGAGCCA CGTCCCACGC CGACAGCACA GCGGAACCTG
CCCCGCGAGA TCCGCGAGGG TCTGGCGTGG GTGTTCGGCA CGCGGATCCT GCGCTGGCTG
GCGTTCGTCG GCTTCTGCTG CAACTTCTCG ATGATCACGG TCTGGACCAT GTTCCTGCTC
TACGGAACAC AGGAGCTGCA TCTAGCCGCC TCCACGCTCG GCGCCATCTT CGCGACGGCT
TCGGTCGGAG GTCTGATCGG AGCAATGGTC TCCCGCGCCG TCATCGCGCG CTTCCGGCTG
GGCCGGGTGT ACTTCTGCGC CCAGACCGCG CTGCTCGCCG GTCCGACTCT CATCGCGGTG
GCCGGCGGGC CGAAGGCGGT GGTTGTGGCG TTGGTGACAG GGTCCTTCTT CACCACGTAC
CTCGGTCTGG GGATCGCGAA CGTGGTGATC GTCAGCCTGC GTCAGGCGGC GACGCCGCAG
GCACTGCTGA GCCGGATGAC CGCCTGCTTC CGGATGCTGC TGTTCGGCGG CGGCGCACTC
GGCGGGCTGA CCGCCGGTCT GTTGTCCGGC GCGATCGGCG ACCGCGATGC CCTGATAGCG
GCAGCGGTGT TCTCGGCGGC GGTCGTCGTC GCGCTGGCGC TCTCGCCGGT GAGTCGGTTG
CGTGAACTGC CCGCGTAG
 
Protein sequence
MTADFPKFWF GETVSLLGTQ VSNLALPLTA ISTFHASNAE VGVLRFLQLA PYIGFALVFG 
AWADRVRRRH VMIATNLVRM ALVGVVPALA ARHELSMPLL LVIACAVGVA SVMFDVSWMP
YAPTLVDGDE RRYVEISAKM GMSSSASDVA GPGLAGLLVS VLSAPTALVV DACSYAVSVT
SLLAIRKQEP RPTPTAQRNL PREIREGLAW VFGTRILRWL AFVGFCCNFS MITVWTMFLL
YGTQELHLAA STLGAIFATA SVGGLIGAMV SRAVIARFRL GRVYFCAQTA LLAGPTLIAV
AGGPKAVVVA LVTGSFFTTY LGLGIANVVI VSLRQAATPQ ALLSRMTACF RMLLFGGGAL
GGLTAGLLSG AIGDRDALIA AAVFSAAVVV ALALSPVSRL RELPA