Gene Caci_8787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8787 
Symbol 
ID8340179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10188776 
End bp10189912 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content71% 
IMG OID644961878 
Productcitrate synthase 2 
Protein accessionYP_003119443 
Protein GI256397879 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.901315 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACT TCGTACCGGG CCTTGAGGGC GTCATCGCCT TCGAGTCCGA AATCGCCGAA 
CCGGATAAGG AAGGCGGCGC TCTCCGGTAC CGCGGAGTCG ACATCGAAGA CCTCGTCGGA
CGCGTGACGT TCGGCAACGT GTGGGGCCTT CTGGTGGACG GCAAGTTCAA CCCGGGTCTG
CCGCCGGCGG AGCCGTACCC GGTGCCGGTG CACTCCGGCG ACGTGCGCGT CGACGTGCAG
TCCGCGCTCG CCATGCTCGC CCCGGTCTGG GGTCTGCAGC CGCTGCTGGA CACCTCGGAG
GAGAAAGCGC GCGAAGACCT CGCTCGCGCC GCGGTGATGG CGCTGTCCTT CGTGGCCCAG
TCCGCGCGCT CGATCGAGCA CCCGGGCCAG GCCATGGTGC CGCAGAGCGA GGTCGACAAG
GCCGAGACGA TCGTCGAGCG CTTCATGATC CGCTGGCGCG GTGAGCCGGA CCCCAAGCAC
GTCCAGGCCA TCGACGCGTA CTGGACCTCG GCGGCCGAGC ACGGCATGAA CGCCTCGACC
TTCACCGCCC GCGTCATCGC CTCCACCGGC GCCGACGCCG CGGCCGCGCT GTCCGGCGCG
GTCGGCGCGA TGTCCGGCCC GCTGCACGGC GGCGCCCCGG CCCGCGTGCT GCACATGGTG
GAAGCCGTCG AGGAGATCGG CGACGCCCGC AAGTACGTCA AGAGCGTGCT GGACAAGGGC
GAGCGCCTGA TGGGCTTCGG CCACCGCGTG TACCGCGCGC AGGACCCGCG TGCCCGCGTC
CTGCGCCGCA CCGCCAAGGA GCTGGACGCG CCCCGCTACG AGGTCGCCCT GGCTCTGGAG
GAGGCCGCGC TGGCCGAGCT GCACGAGCGC CGCCCGGACC GGGTGCTGGA GACCAACGTC
GAGTTCTGGG CCGCCGTGGT CCTGGACTTC GCGCAGGTCC CGGCGAACAT GTTCACCTCG
CTGTTCACCT GTGCCCGCAC CGCCGGATGG AGCGCGCACA TCCTGGAGCA GAAGAAGACC
GGCCGCCTGA TCCGGCCGTC CTCCCGCTAC GTGGGCCCGG GCCCGCGCAA GCCGGAGACC
GTCGAGGGCT TCGAGACGAT GGTGCCGCCG AGCGGCTTCC ACACGTACAA GGGCTGA
 
Protein sequence
MSDFVPGLEG VIAFESEIAE PDKEGGALRY RGVDIEDLVG RVTFGNVWGL LVDGKFNPGL 
PPAEPYPVPV HSGDVRVDVQ SALAMLAPVW GLQPLLDTSE EKAREDLARA AVMALSFVAQ
SARSIEHPGQ AMVPQSEVDK AETIVERFMI RWRGEPDPKH VQAIDAYWTS AAEHGMNAST
FTARVIASTG ADAAAALSGA VGAMSGPLHG GAPARVLHMV EAVEEIGDAR KYVKSVLDKG
ERLMGFGHRV YRAQDPRARV LRRTAKELDA PRYEVALALE EAALAELHER RPDRVLETNV
EFWAAVVLDF AQVPANMFTS LFTCARTAGW SAHILEQKKT GRLIRPSSRY VGPGPRKPET
VEGFETMVPP SGFHTYKG