Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8787 |
Symbol | |
ID | 8340179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 10188776 |
End bp | 10189912 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644961878 |
Product | citrate synthase 2 |
Protein accession | YP_003119443 |
Protein GI | 256397879 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.901315 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACT TCGTACCGGG CCTTGAGGGC GTCATCGCCT TCGAGTCCGA AATCGCCGAA CCGGATAAGG AAGGCGGCGC TCTCCGGTAC CGCGGAGTCG ACATCGAAGA CCTCGTCGGA CGCGTGACGT TCGGCAACGT GTGGGGCCTT CTGGTGGACG GCAAGTTCAA CCCGGGTCTG CCGCCGGCGG AGCCGTACCC GGTGCCGGTG CACTCCGGCG ACGTGCGCGT CGACGTGCAG TCCGCGCTCG CCATGCTCGC CCCGGTCTGG GGTCTGCAGC CGCTGCTGGA CACCTCGGAG GAGAAAGCGC GCGAAGACCT CGCTCGCGCC GCGGTGATGG CGCTGTCCTT CGTGGCCCAG TCCGCGCGCT CGATCGAGCA CCCGGGCCAG GCCATGGTGC CGCAGAGCGA GGTCGACAAG GCCGAGACGA TCGTCGAGCG CTTCATGATC CGCTGGCGCG GTGAGCCGGA CCCCAAGCAC GTCCAGGCCA TCGACGCGTA CTGGACCTCG GCGGCCGAGC ACGGCATGAA CGCCTCGACC TTCACCGCCC GCGTCATCGC CTCCACCGGC GCCGACGCCG CGGCCGCGCT GTCCGGCGCG GTCGGCGCGA TGTCCGGCCC GCTGCACGGC GGCGCCCCGG CCCGCGTGCT GCACATGGTG GAAGCCGTCG AGGAGATCGG CGACGCCCGC AAGTACGTCA AGAGCGTGCT GGACAAGGGC GAGCGCCTGA TGGGCTTCGG CCACCGCGTG TACCGCGCGC AGGACCCGCG TGCCCGCGTC CTGCGCCGCA CCGCCAAGGA GCTGGACGCG CCCCGCTACG AGGTCGCCCT GGCTCTGGAG GAGGCCGCGC TGGCCGAGCT GCACGAGCGC CGCCCGGACC GGGTGCTGGA GACCAACGTC GAGTTCTGGG CCGCCGTGGT CCTGGACTTC GCGCAGGTCC CGGCGAACAT GTTCACCTCG CTGTTCACCT GTGCCCGCAC CGCCGGATGG AGCGCGCACA TCCTGGAGCA GAAGAAGACC GGCCGCCTGA TCCGGCCGTC CTCCCGCTAC GTGGGCCCGG GCCCGCGCAA GCCGGAGACC GTCGAGGGCT TCGAGACGAT GGTGCCGCCG AGCGGCTTCC ACACGTACAA GGGCTGA
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Protein sequence | MSDFVPGLEG VIAFESEIAE PDKEGGALRY RGVDIEDLVG RVTFGNVWGL LVDGKFNPGL PPAEPYPVPV HSGDVRVDVQ SALAMLAPVW GLQPLLDTSE EKAREDLARA AVMALSFVAQ SARSIEHPGQ AMVPQSEVDK AETIVERFMI RWRGEPDPKH VQAIDAYWTS AAEHGMNAST FTARVIASTG ADAAAALSGA VGAMSGPLHG GAPARVLHMV EAVEEIGDAR KYVKSVLDKG ERLMGFGHRV YRAQDPRARV LRRTAKELDA PRYEVALALE EAALAELHER RPDRVLETNV EFWAAVVLDF AQVPANMFTS LFTCARTAGW SAHILEQKKT GRLIRPSSRY VGPGPRKPET VEGFETMVPP SGFHTYKG
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