Gene Caci_8766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8766 
SymbolfbiC 
ID8340158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10164767 
End bp10167340 
Gene Length2574 bp 
Protein Length857 aa 
Translation table11 
GC content71% 
IMG OID644961857 
ProductFO synthase 
Protein accessionYP_003119422 
Protein GI256397858 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 
TIGRFAM ID[TIGR00423] radical SAM domain protein, CofH subfamily
[TIGR03550] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit
[TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.977085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.875781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGC AGCCGACCGC CAATGCCATG CGCCGTGCCC TGCACCGGGC GGGTGAGGGA 
GTCGCGCTCA GCGTCGAGGA GGCGGCGGTC CTGCTCGCCG CGCGCGGCGC CGATCTGGAC
GCGCTGTGCG CCGTCGCCTC CCGCCTGCGG GATCAGGGCC TGGAGGCGGC TGGCCGTCCC
GGAGTGGTCA CCTACTCCCG CAAGGTCTTC ATCCCCCTGA CCCGGCTGTG CCGCGACCGG
TGCCACTACT GCACCTTCGT GACCGTCCCC GGCCGCCTGG ACTCCCTGTA CCTGTCCCCC
GACGAAGTGC TGGACATCGC GGCGAAGGGT GCGGCACTCG GCTGCAAGGA AGCCCTGTTC
ACGCTCGGCG ACCGGCCCGA GGACCGCTGG CCGCAGGCGA AGGAGTGGCT GGACGCGCAC
GGCTACGACT CGACCCTGGA CTACGTCCGG GCCATGTCGA TCCGGGTGCT GGAGGAGACC
GGACTGCTGC CGCACCTGAA TCCCGGCGTC CTGTCCTGGT CCGACTTCCA GCGGCTCAAG
CCGGTCGCTC CGTCGATGGG CATGATGCTG GAGACCACCG CCACCCGGCT GTGGTCGGAG
CCGGGCGGCC CGCACTACGG CTCGCCGGAC AAGGAGCCCG CGGTCCGGCA GCGCGTGCTG
GAGGACGCCG GGCGCTCCTC GGTGCCGTTC ACCACGGGCA TCCTGATCGG GATCGGCGAG
ACGCTGGAGG AGCGCGCCGA CTCGCTGTTC GCGATGCGGA AGGTCGCGCG GACCTATCGC
GGCATCCAAG AGATCATCAT CCAGAACTTC CGGGCGAAGC CGGACACGGC GATGATGAAC
ACGCCCGACG CCGACCTGGA AGAGCTCGCC GCGACGATCG CCACCGCGCG CGTCGTCCTC
GGCCCTTCGG TCCGGATCCA GGCGCCGCCG AATTTGGTGG ACGCCGAGTA CGCGCTGATG
CTGCGGGCCG GGATCGACGA CTGGGGCGGC GTCTCGCCGC TGACCGCCGA CCACGTCAAC
CCCGAGCGTC CGTGGCCGGC CATCGACGAG CTGGCGGCGC AGTCCGCCTC GGCCGGTTTC
ACGCTGAAGG AACGGCTGAC GATCTACCCC GAGTACGTGC TGCACGGCGA GCCGTGGCTG
GACCCGCGGA TCATGCCGCA CGTCCGGGCG CTCGCCGATC CCGAGACCGG GATGGCCGTC
GAGGGCCGCA TCCCCACCGG AATCCGGTGG CAGGAGCCTG ACGGCGGCTG GGACGCCTCC
AGCGGACGCA CCGACCTGCA TACGGCGATC GACACCGAAG GCCGCACCGA GGACCGCCGC
TCGGACTTCT CAGACGTCTA CGGCGACTGG GACGAGCTGC GCGAGCACGC CTCGCGCACC
TCCGTGGACC ACAGCGCGCC CGAGCGCATC GACGCCGCGG TGAAGACGGC GCTCGCCGCC
GCCGAGCGCG ACCCCGGGAA CCTCTCCGAC ACCGACGCGC TCGCGCTGAT CCACGCCGAC
GGCCCGGCGC TGGACGCCCT GGCCGCGCTG GCCGACGGCC TGCGGCGGGA CGCGGTCGGC
GACGAGGTGA CGTACATCGT CAACCGGAAC ATCAACTTCA CCAACGTCTG CTACACCGGC
TGCCGGTTCT GCGCCTTCGC TCAGCGGCGC ACGGACGCCG ACGCGTACAC GCTGTCCGTC
TCCGAGGTCG GCGACCGCGC GGCAGCGGCC TGGCAGGTCG GCGCCACCGA GATCTGCATG
CAGGGCGGCA TCCACCCGGA CCTGCCCGGC ACCGCCTACT TCGACCTGGC CGCCGAGATC
AAGCGCCGGG TCCCCGAGCT GCACCTGCAC GCCTACTCGC CGATGGAGAT CATCAACGGC
GTCTCCCGGA CCGGCATGTC CATCCGGGAC TTCCTCACCG CGGCCAAGGA GGCCGGCGTC
GACTCGCTGC CGGGCACCGC CGCGGAGATC CTCGACGACG ACGTGCGCTG GGTGCTGACC
AAGGGCAAGC TGCCGGCCGC GCAGTGGATC GAGGTGATCA CCACCGCGCA CCAGGTCGGC
ATCCCGACCA CGTCGACGAT GATGTACGGG CACGTCGACA ACCCCGCGCA CTGGGTCGGG
CACCTGCGGG TCCTGGCGCG CATCCAGGAC GAGACCGGCG GGTTCACCGA GTTCGTGCCG
CTGCCGTTCG TGCACTCCAA CGCCCCGGTC TACCTCGCCG GCCTCGCGCG TCCCGGACCG
ACGCTGCGGG ACAACCGCGC GGTCCACGCG ATGGCCCGGA TCATGCTGCA CGGCCGTATC
CCCAACATCC AGACGTCGTG GGTCAAGCTC GGCACGGACA ACTCCCGGCT CATGCTCGCC
GGCGGCGTCA ACGACATGGG CGGCACGCTC ATGGAGGAGA CCATCTCCCG GATGGCCGGC
TCGGAGTACG GCTCGGCGAA GGGCATCGCC GAACTCGAGG AGATCTGCGC TCCGCTCGGC
CGTCCGACCC GGCAGCGCTC GACGCTGTAC GGACAGGTGC CCGCAGAGCG CGTCCAGGCC
GCTCGCGAGG CCGACTCCCA GGGTCTGCTG CGCACGATGC TGCCGCTGGC TTAG
 
Protein sequence
MTMQPTANAM RRALHRAGEG VALSVEEAAV LLAARGADLD ALCAVASRLR DQGLEAAGRP 
GVVTYSRKVF IPLTRLCRDR CHYCTFVTVP GRLDSLYLSP DEVLDIAAKG AALGCKEALF
TLGDRPEDRW PQAKEWLDAH GYDSTLDYVR AMSIRVLEET GLLPHLNPGV LSWSDFQRLK
PVAPSMGMML ETTATRLWSE PGGPHYGSPD KEPAVRQRVL EDAGRSSVPF TTGILIGIGE
TLEERADSLF AMRKVARTYR GIQEIIIQNF RAKPDTAMMN TPDADLEELA ATIATARVVL
GPSVRIQAPP NLVDAEYALM LRAGIDDWGG VSPLTADHVN PERPWPAIDE LAAQSASAGF
TLKERLTIYP EYVLHGEPWL DPRIMPHVRA LADPETGMAV EGRIPTGIRW QEPDGGWDAS
SGRTDLHTAI DTEGRTEDRR SDFSDVYGDW DELREHASRT SVDHSAPERI DAAVKTALAA
AERDPGNLSD TDALALIHAD GPALDALAAL ADGLRRDAVG DEVTYIVNRN INFTNVCYTG
CRFCAFAQRR TDADAYTLSV SEVGDRAAAA WQVGATEICM QGGIHPDLPG TAYFDLAAEI
KRRVPELHLH AYSPMEIING VSRTGMSIRD FLTAAKEAGV DSLPGTAAEI LDDDVRWVLT
KGKLPAAQWI EVITTAHQVG IPTTSTMMYG HVDNPAHWVG HLRVLARIQD ETGGFTEFVP
LPFVHSNAPV YLAGLARPGP TLRDNRAVHA MARIMLHGRI PNIQTSWVKL GTDNSRLMLA
GGVNDMGGTL MEETISRMAG SEYGSAKGIA ELEEICAPLG RPTRQRSTLY GQVPAERVQA
AREADSQGLL RTMLPLA