| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8660 |
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| Symbol | |
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| ID | 8340042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 10043761 |
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| End bp | 10045152 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644961741 |
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| Product | glutamate decarboxylase |
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| Protein accession | YP_003119316 |
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| Protein GI | 256397752 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | [TIGR01788] glutamate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCACA ACCACAGCGA ACGTGATCTG AGCGGGGACG TGGACGTCAA CCCGCTGTTC
GCCCGGCCCG GAGAGCTGCG CAGCAGGCCG CGGACGAGGC TGCCCGACGC GCCGATGCTG
CCGGAGACGG CCTACCAGCT GGTGCACGAC GAGGCGATGC TCGACGGCAA CGCGCGCCTG
AACCTGGCGA CGTTCGTCGG CACCTGGATG GACAGCCAGG CGCGCAAGCT GTATCTGGAA
GCCTTCGACA AGAACATGAT CGACAAGGAC GAGTACCCGA GCACCGCGGC GATCGAGGAG
CGGTGCTGGC GGATCCTGGC CGACCTGTGG CACGCGCCGG ATCAGGACCG TGCCATCGGC
TGCTCCACCA TCGGCTCCTC CGAGGCCTGC ATGCTCGGCG GCCTGGCCTT CAAGCGGCGC
TGGCAAGAGG CGCGCCGGGC GGCCGGCAAG CCGGCCGACC GCCCGAACCT GGTGATGAGC
TCGGCGGTAC AGGTGGTGTG GGAGAAGTTC TGCAACTACT GGGACGTCGA GCCGCGCTAC
GTGCCGATCA CCGAGGAGCA CAAGACGCTC GACGGCGCCG ACCTGAAGTC CCACGTCGAC
GAGAACACCA TCGGCGTGGT CAGCATCCTC GGCGTCACCT ACACCGGCAT GTACGAGCCG
GTCCTGGAGG TCAGCCGCGC GCTGGACGAG ATCCAGCGCG ACACCGGCCT GGACATCCCG
ATCCACGTCG ACGGCGCCTC CGGGGCGATG GTCGCCCCGT TCCTGCAGCC CACGCTGGAG
TGGGATTTCC GGGTCCCGCG CGTGGCCTCG ATCAACACCT CCGGCCACAA GTACGGGCTC
GTCAACCCGG GTCTGGGTTG GGTCCTGTGG CGGGACAGGG ACCTGCTGCC GGAGAGCCTG
GTCTTCAAGG TGAGCTACCT CGGCGGCGAG ATGCCGACCT TCGGCCTGAA CTTCTCACGC
CCGGCCGCGC AGGTCCTGGT GCAGTACTTC CAGTTCCTGC GGCTGGGACG GCTGGGCTAT
CACGAGGTCC AGAAGGCGTC CCACGACGTC GCGCGCTACC TCGCCGACCG CATCAGCGCG
ATGGACTGCT TCGACTTGTG GAACGACGCT TCCGACATCC CCGTGTTCGC CTGGCGCAAG
GCCGCCGGCC ACAACCCGAA CTGGACGCTC TACGACGTCT CCGACCGGCT GCGGATGAAG
GGCTGGCTGG TCCCGGCGTA CCCGATGCCC GACAACCTGT CGGACACCGT GGTGCAGCGG
GTCGTGATCC GCAACGGCAT GAGCATGGAC CTGGCCGCGA ACCTCATGCG CGACCTGCAG
GACTCGGTCG ACTACCTCGA CCGGCTGAAG GAGCCGCTGC CGGACGTCGA ACGCTCGGTG
TTCCACCACT GA
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| Protein sequence | MRHNHSERDL SGDVDVNPLF ARPGELRSRP RTRLPDAPML PETAYQLVHD EAMLDGNARL
NLATFVGTWM DSQARKLYLE AFDKNMIDKD EYPSTAAIEE RCWRILADLW HAPDQDRAIG
CSTIGSSEAC MLGGLAFKRR WQEARRAAGK PADRPNLVMS SAVQVVWEKF CNYWDVEPRY
VPITEEHKTL DGADLKSHVD ENTIGVVSIL GVTYTGMYEP VLEVSRALDE IQRDTGLDIP
IHVDGASGAM VAPFLQPTLE WDFRVPRVAS INTSGHKYGL VNPGLGWVLW RDRDLLPESL
VFKVSYLGGE MPTFGLNFSR PAAQVLVQYF QFLRLGRLGY HEVQKASHDV ARYLADRISA
MDCFDLWNDA SDIPVFAWRK AAGHNPNWTL YDVSDRLRMK GWLVPAYPMP DNLSDTVVQR
VVIRNGMSMD LAANLMRDLQ DSVDYLDRLK EPLPDVERSV FHH
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