Gene Caci_8587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8587 
Symbol 
ID8339969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9958097 
End bp9958573 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content69% 
IMG OID644961672 
Productputative signal transduction histidine kinase 
Protein accessionYP_003119247 
Protein GI256397683 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00197112 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.613164 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTCT GGTCCAGGGG GTTCGCCGGT CGGCCGGAGT GCCTGAGTGA GGTCCGCTGC 
TTCATCCTCG CCGTTCTCGG CGACTGCGAT ACCGCGCACG TCGTCGCGCT GATCGCCGAC
GAGCTGGTTG CCAACGCCAT CAAGCACACG GCCAGCGGCG GACCTGGAGG GGAACTCGTC
CTGCGGCTGA CCAGGTTCGC CGACCGGTGC CGGGTGCGCG TTGACGACCA GGGCGGGTCC
ACCATGCCTG CGGTCCGCGT CGCCGAGGAC GACGAGGAGG CCGGGCGAGG CCTGACCATT
GTCGCGCTTT TGTCCGCCCA CTGGGGCGTG GACGGCGACG AGAAGGCCCG CTCGGTCTGG
GCCGAGATCA CCTTTGACGA GGTCGCGGCG ATACCCGGGC CGCCGGCCAA TGGCCTTCCC
CGCGAGTTGA GAACTAGACG AGAGGTCGGT ATGGCGATGG ACGACAGGAC GCGTTGA
 
Protein sequence
MQVWSRGFAG RPECLSEVRC FILAVLGDCD TAHVVALIAD ELVANAIKHT ASGGPGGELV 
LRLTRFADRC RVRVDDQGGS TMPAVRVAED DEEAGRGLTI VALLSAHWGV DGDEKARSVW
AEITFDEVAA IPGPPANGLP RELRTRREVG MAMDDRTR