| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8558 |
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| Symbol | |
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| ID | 8339938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9928641 |
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| End bp | 9930272 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644961642 |
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| Product | replication initiator protein |
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| Protein accession | YP_003119219 |
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| Protein GI | 256397655 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0404857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00106122 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACTTCGC AACAGCTCAA GCCAGTAGCG CCGTCCGGGA TCACGGGAAG CCGTGCCGAA
CGTGCCCGGA TGCCGCTGGC TCGCAAGGTC CTGGAAGAGT CGGCGATCAA GCATGGCGTC
TGCATCCGGC CAGTCCCGCT GCGACGCGTC GACCTCGCGA CCGGCGAAGA ACAGATCATA
GACATCCCAT GCGGCGCGAC CCTTTCGAGC GTCTGCCCGC CGTGTGCGGA GGCCAAGCGG
CAGCTTCGGA TCGATCAGTG CCGTACCGGC TGGCACCTGG AGCAGGAGCC TGACTTCACT
CCCGATCCGG CGACCGACGA ACAGCACCTC CTCGTTCAGC TCCGCTCGCA AGCTCAGAAG
TCCCTCGACG ACTCGGACGA CTCCGAGGTG GCCGAGTGGG AAGAGACCGT CTCCGAGATC
AACACAGAAC TGGCGGCGAC CGGCGTCCGC GGCCGACTGG GCGTCGAGAA GGCAGCCCGG
CGTGTCCGAT CCACGCGGCG CCGTCAGGAC GCGTCGGAGC TCCCGAGGCG TCCCGTAAGT
ACGCGGACAG TCGGCAAGGT CTACGAATCG GCCAGCGGAA AGAAGTTCCG TCCGTCGATG
TTCCTGACCC TCACGCTCGA CAGCTACGGC AGGGTCACCA AGGACGGGAC ACCGGTCCAG
CCGGCCGCCT ACGACTACCA GCGGGCTGCC CGCGACGCGA TCCACTTCGC GAAGCTCGTC
GACCGCTTCG TTCAAAACCT CCGTCGCTTC GTCGGCTTCG ATGTACAGTA CTTCGCGGCC
GTCGAGCCAC AGCGCCGGTT AGCGCCCCAC CTGCACATGG CGATCCGCGG CACCATCTCC
CGAGCCGAGC TCCGCGAGGT CATCGCCGCG ACCTATCACC AAGTGTGGTG GCCGCCGACC
GATGAGCCGG TGTACGTCGA CCAGCTGCCG GAGTGGCATG ACGGCACTGG CGCCTACGTC
GACGCGACGA CCGGCGAGAT CCTGCCCACC TGGGATCAGG CTCTCGACGA GATCGGCCCG
GACGACGAAC CGTCGCACGT AGCTCGCTTC GGGAGGCAGT TCGACGCGCA AGGCGTCCTA
GCCGGTACGA AGGATGCGAA CCGCACGATC GGCTACCTGG CCAAATACGT GACCAAGAGT
GTCGACGAGT GCCACGAAGC GGCCACCGAC GATCAGCGGG ACCACGTCTC ACGCCTCGTC
GAAGCACTTC GTTACGAACC ATGCTCACCG ACCTGCGCGA ACTGGCTCCG CTACGGCGTT
CAGCCGAAGA ACCCTCGTCC TGGTCTCCAC CCGGGCGCCT GTCGCGGCAA GGCACACAAG
CCGACTCACC TCGGCTACGG CGGACGTCGC GTCCTGGTCT CCCGCAAGTG GTCCGGAAAG
ACACTCACCG ACCACAAGAC GGATCGTAAG AACTGGGTGA CCGAAATCCT GGGCGTCGAG
CCTCAGATGC CGACGCCAGG TCGCTTCTCG TTCGAGTACG TCTCGCGCGA CGACGCCAAG
CTCAAGCCGC TGACGGTCCG CCTCATGCAC CGCATCGCAG ACCGCGTCAC CTGGCGAGCC
CAGCTCGACG CAGCGCGCAA CGGTCCACGA TCTCCGGCAG ATCTTTCGGC AACAGCAGGG
AGGTCGTCGT GA
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| Protein sequence | MTSQQLKPVA PSGITGSRAE RARMPLARKV LEESAIKHGV CIRPVPLRRV DLATGEEQII
DIPCGATLSS VCPPCAEAKR QLRIDQCRTG WHLEQEPDFT PDPATDEQHL LVQLRSQAQK
SLDDSDDSEV AEWEETVSEI NTELAATGVR GRLGVEKAAR RVRSTRRRQD ASELPRRPVS
TRTVGKVYES ASGKKFRPSM FLTLTLDSYG RVTKDGTPVQ PAAYDYQRAA RDAIHFAKLV
DRFVQNLRRF VGFDVQYFAA VEPQRRLAPH LHMAIRGTIS RAELREVIAA TYHQVWWPPT
DEPVYVDQLP EWHDGTGAYV DATTGEILPT WDQALDEIGP DDEPSHVARF GRQFDAQGVL
AGTKDANRTI GYLAKYVTKS VDECHEAATD DQRDHVSRLV EALRYEPCSP TCANWLRYGV
QPKNPRPGLH PGACRGKAHK PTHLGYGGRR VLVSRKWSGK TLTDHKTDRK NWVTEILGVE
PQMPTPGRFS FEYVSRDDAK LKPLTVRLMH RIADRVTWRA QLDAARNGPR SPADLSATAG
RSS
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