| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8553 |
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| Symbol | |
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| ID | 8339933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9925084 |
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| End bp | 9925812 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644961637 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_003119214 |
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| Protein GI | 256397650 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0729344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.000642156 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCTTTCG AGTCGGCGCC ACCGAAGTAC GCGCGGGTCG TCACGGGACT GCAAGAGCGG
ATCTTGGATG GCAGGTACCC GGCCGGCTCG ATGCTGCCCA GCGAAGAACA GTTGGTCAAC
GAGTGGGACA TGTCTCGGAC CACTATTATC AGGGCTCTGC AAATCCTGAG TCGCGATGGC
TGGATCGAAT CGCAGCAGGG CAAGGGTCGT TTCGTACGCG GCCGGCCCGC TGCGATGGAT
CAGCGGTTCC GACCCAGCCG GAACGCGCTG GAGCAGAGCG AGACCAGCGG TAGCAGGTTG
GTCGACGTCG GGCACGTCAT CGCTCCCAAC GCCGTGGCGG CGGCATTGAA TCTGAAGAAG
AACGAAGCCG TGCTCATGCG ACGACGCTTG GTCGTCCGCG ACGACGAGCC CGACGAGCTG
GTCACCTCGT ACTTCCCGCT GGACCTCGCC CACGGCACCG CGCTCGGTGC CGAAACGCTG
ATGAGCGAAG GTGCCAGGTA TCAGGTCGAG TCACGAAACA AGATCCGGTA CGACCACATC
ACGGAACGAA TCGCTGCTCG ACTTCCATCC GGTGAAGAGG CGTTGTTACT CGGTCTGCCG
AGCAAGCGGA CGCCTGTGCT CGCGGTGACG GTCACGGCGT TCGCGGCATC CGGTCGACCG
GTCCAGCTCG CCGAACTCGT GCTCCCGGGC GACCGGCACG AACTCGAAGA CACCTACCCC
TTGGTTTGA
|
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| Protein sequence | MPFESAPPKY ARVVTGLQER ILDGRYPAGS MLPSEEQLVN EWDMSRTTII RALQILSRDG
WIESQQGKGR FVRGRPAAMD QRFRPSRNAL EQSETSGSRL VDVGHVIAPN AVAAALNLKK
NEAVLMRRRL VVRDDEPDEL VTSYFPLDLA HGTALGAETL MSEGARYQVE SRNKIRYDHI
TERIAARLPS GEEALLLGLP SKRTPVLAVT VTAFAASGRP VQLAELVLPG DRHELEDTYP
LV
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