Gene Caci_8546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8546 
Symbol 
ID8339926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9920528 
End bp9921229 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content60% 
IMG OID644961630 
Producthypothetical protein 
Protein accessionYP_003119207 
Protein GI256397643 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000672005 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000280584 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCTTTC GCTACCGCAA GACGTTCAAG GCCGGACCGA TTAGGGTGAC GGCATCAAAG 
TCCGGCATCA GCTACTCGGC TGGTGTGAAG GGCGCCCGCG TCACCAAGCG CGCCGATGGT
CGCGTACAGA CAACACTGTC TGCACCTGGA ACGGGGCTGA GCTACACCAA GTCCAGTAGC
AGCACGAAGA AGCCGACTCG CGCCAGCTCG GTGAAGGCTG CAAAGCCGAC CGCTACACCG
ACTAAGAGTC AGGCTGCGAA GCGTCGCATG CCCACCCGAT CCGAGCTTGA GCAAGCCTGG
CGAGCAACGG GACGGCCGCT TCCAGCGCAC GGAACTCGCA TCAGCGAGCG CAAGGCGACG
TTCCTCGCGG GCTTCATGGG CTTGATCGCG AGACCTGACG AGGAGACTTA CTTCTTCTTG
AATATCAGCA AGCTTAACCC GGCGCGGGAT GTCTTGGTCT TGACGTCACA GCGGTTGCTG
ATGTTCCAGG CCAACCAGGT CCTTCGCAAC AGCAAGATCC TTGCTGTCGA CCTCAGTTCA
CTGCGAGCTG TAACCATTCG ACGCCGACCC TGGTCGGCAT CGTTGGTCCT GCACGATTTC
GAAGGCACCG ATCAGATTGT TTGCGGAACA GTAAGCCCCA AGGCCCTCGT GTGGTTGAGG
GAGACCACCA AGCACGATCC CCTGTTCGTC TTGCCTGACT GA
 
Protein sequence
MGFRYRKTFK AGPIRVTASK SGISYSAGVK GARVTKRADG RVQTTLSAPG TGLSYTKSSS 
STKKPTRASS VKAAKPTATP TKSQAAKRRM PTRSELEQAW RATGRPLPAH GTRISERKAT
FLAGFMGLIA RPDEETYFFL NISKLNPARD VLVLTSQRLL MFQANQVLRN SKILAVDLSS
LRAVTIRRRP WSASLVLHDF EGTDQIVCGT VSPKALVWLR ETTKHDPLFV LPD