Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8546 |
Symbol | |
ID | 8339926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9920528 |
End bp | 9921229 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644961630 |
Product | hypothetical protein |
Protein accession | YP_003119207 |
Protein GI | 256397643 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000672005 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000280584 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGCTTTC GCTACCGCAA GACGTTCAAG GCCGGACCGA TTAGGGTGAC GGCATCAAAG TCCGGCATCA GCTACTCGGC TGGTGTGAAG GGCGCCCGCG TCACCAAGCG CGCCGATGGT CGCGTACAGA CAACACTGTC TGCACCTGGA ACGGGGCTGA GCTACACCAA GTCCAGTAGC AGCACGAAGA AGCCGACTCG CGCCAGCTCG GTGAAGGCTG CAAAGCCGAC CGCTACACCG ACTAAGAGTC AGGCTGCGAA GCGTCGCATG CCCACCCGAT CCGAGCTTGA GCAAGCCTGG CGAGCAACGG GACGGCCGCT TCCAGCGCAC GGAACTCGCA TCAGCGAGCG CAAGGCGACG TTCCTCGCGG GCTTCATGGG CTTGATCGCG AGACCTGACG AGGAGACTTA CTTCTTCTTG AATATCAGCA AGCTTAACCC GGCGCGGGAT GTCTTGGTCT TGACGTCACA GCGGTTGCTG ATGTTCCAGG CCAACCAGGT CCTTCGCAAC AGCAAGATCC TTGCTGTCGA CCTCAGTTCA CTGCGAGCTG TAACCATTCG ACGCCGACCC TGGTCGGCAT CGTTGGTCCT GCACGATTTC GAAGGCACCG ATCAGATTGT TTGCGGAACA GTAAGCCCCA AGGCCCTCGT GTGGTTGAGG GAGACCACCA AGCACGATCC CCTGTTCGTC TTGCCTGACT GA
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Protein sequence | MGFRYRKTFK AGPIRVTASK SGISYSAGVK GARVTKRADG RVQTTLSAPG TGLSYTKSSS STKKPTRASS VKAAKPTATP TKSQAAKRRM PTRSELEQAW RATGRPLPAH GTRISERKAT FLAGFMGLIA RPDEETYFFL NISKLNPARD VLVLTSQRLL MFQANQVLRN SKILAVDLSS LRAVTIRRRP WSASLVLHDF EGTDQIVCGT VSPKALVWLR ETTKHDPLFV LPD
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