| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8502 |
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| Symbol | |
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| ID | 8339882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9861562 |
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| End bp | 9863094 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644961589 |
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| Product | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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| Protein accession | YP_003119166 |
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| Protein GI | 256397602 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.129361 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAGA TTCCGTGGGG GGATTTCGGC ATGGCGGTCG GGTCAAGCTT GGAAAGTCCA
GTCGTGCGGG TACACCTCGC ACGGCCCTGG GCGACGAGAT ATCTAAGGAG CGCCATCACG
GCGCTCCTCC TAGCGATGGA CTGGACCTGC GCGACAGCGG CCACCTGGCT CGCCGTCCCG
GTCCAGGACG ACTGGCCGGC GTTGGTCGCC GTGCCCGTCG CATGGGTCGG CGCCGCGGGC
GCGCACCGGC TCTACGAACG GCGCCATGTA GGACCGGGGA CCGAGGAGTA TCACAGGATT
CTGCGGGCCT GCCTGGCCGC GATGGCAGCG CTGTCGGCGC TGTGCGCGCT GGTGGCCCGC
AACGACCGTT TGGTGCGCAG TGTTCTGGTC GCCGTGCCGA TCGCGGCGGT GGGCTCGCTT
CTGGCCCGCA AGGCGTTCCG TTCGTTGCAG GCCCGGCACG CCGGGCTTGC TTCGCGTCCG
GCGCTTCTGG TCGGCAGCTC CATTCAATGC TCGGCGATGG CGGCGATCCT GCGGCGCGAG
CGTTCGGCGC TGCGCGCGGT CGCGGCGCTG AACGTCGCCG GACCGAGCCA GGGGACGGCG
CCGCTGTCCC AGGCTTCGGG CTCGGTGCCG CCGACACCGC AGGACCCGCT GGACCCGTTG
AACGTCGGCA CGCTGACCGC GCACGGCGGG CCCAGCGACG CCGAGCAGGT CGCAACGGCC
CTGGAGGTGA CCGGCTGCGA GGTCGTGGTG CTGATGCCCG GTCCGCATCT GGGAGCGGCG
GCGTTGAGCG CTCTGGGCTG GCGGCTGGCC AGCCTGGGCG TGGACATCCT GGTCGCCCCG
TTCCTCACCG AGATCGCGCC GGCGCGGCTG GCGGTCCGGC GCGACGGCGG CGTCCCGCTG
TTCCACGTCC GCGCGCCGCG GCTCTCGCGC GGCGCGCGGG TCCCGAAGGA GCTCGGCGAG
CGGGTGATGG CGGCGATCGG CCTGCTGCTG CTGGCGCCGA TCTTCCTGGC GGTATCGCTG
GCGGTGCTGC TCGGCGACGG GCGGCCGATC TACTTCCGGC AGACGCGGGT CGGGCTCAAC
GGGGAGCACT TCGTCCTCTA CAAGTTCCGC ACCATGTCCA CCGGCGCGGC ACAGGCGAAG
AAGGAACTCG CGCACCTGAA CGTCAACTCC GACGGTCTGC TGTTCAAGAT GCGGCGGGAC
CCGCGGGTGA CGAAGGTCGG CGCGGTGCTG CGCCGGTACT CGCTGGACGA GCTGCCGCAG
CTGCTCAACG TCGTGCGCGG CGACATGGCC CTGGTCGGGC CGCGTCCGCC GCTGCCGGAA
GAGGCCGCCA AGTACAGCGA GGAGGTCCGG CGCCGGCTGC TGGTCAAGCC GGGCCTGACC
GGGCTGTGGC AGGTGAGCGG ACGTTCCGAC CTGGCGTGGG CGGACGCGGT GCGGTTGGAC
CTGGGATACG TCGAGAACTG GTCGCTGGGC CTGGACGCGG AGATCTTGCT CCGCACCGGC
TCGGCGGTCG TCAAGGGCAA AGGAGCTTAC TGA
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| Protein sequence | MDEIPWGDFG MAVGSSLESP VVRVHLARPW ATRYLRSAIT ALLLAMDWTC ATAATWLAVP
VQDDWPALVA VPVAWVGAAG AHRLYERRHV GPGTEEYHRI LRACLAAMAA LSALCALVAR
NDRLVRSVLV AVPIAAVGSL LARKAFRSLQ ARHAGLASRP ALLVGSSIQC SAMAAILRRE
RSALRAVAAL NVAGPSQGTA PLSQASGSVP PTPQDPLDPL NVGTLTAHGG PSDAEQVATA
LEVTGCEVVV LMPGPHLGAA ALSALGWRLA SLGVDILVAP FLTEIAPARL AVRRDGGVPL
FHVRAPRLSR GARVPKELGE RVMAAIGLLL LAPIFLAVSL AVLLGDGRPI YFRQTRVGLN
GEHFVLYKFR TMSTGAAQAK KELAHLNVNS DGLLFKMRRD PRVTKVGAVL RRYSLDELPQ
LLNVVRGDMA LVGPRPPLPE EAAKYSEEVR RRLLVKPGLT GLWQVSGRSD LAWADAVRLD
LGYVENWSLG LDAEILLRTG SAVVKGKGAY
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