Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8492 |
Symbol | |
ID | 8339872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9847060 |
End bp | 9848661 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644961579 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_003119156 |
Protein GI | 256397592 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.941649 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGT CGCAGAACAT CCCTGACGCT GATTCGGAAG CCGCTCCAGG AGGCGCTCCA GAGGGTGCCC CGGAAGGCAT CCCGGAGGCC GCTCCCGAAT CGCTCGGCGA CCGGGTCCGC TCCGCCGCCA AGTGGAGCCT CATCAACACC CTGCTGATCC GCATCGGCAC GTTCGCCACC GGCGTGATCC TGGCGCGCGG GGCGCTGACG CCGCGCGACT GGGGACTGTA CGCGGTCGGC GGCGTCGCGC AAGCGGTGTT GTTGTCGTTC AACGAGTTGG GCGTCAGCCT GGCTGTGGTG CGCTGGGATC GCGACCCGCG CTCGTTCGCG CCGACGGTGG TCACGCTCGC GACGGCCTCC AGCACGGCGT TGTATGTCGG GCTGTGGTTC CTGGCCCACG ACATCGCCAT CATGCTGGGC TCGCCGGACG CGACCGGCGT CCTGCGGATC CTGTGCTTCG CGGTGGTCGT GGACGGCGTG GCGTGCGTCC CGAACGCGGT GCTGATGCGC GAGTTCCGGC AGCGGGCGCG GCTGACGATC GACTTGCTGA CGTTCGTCGT CAGCTCCGGG CTGACGCTGC TGCTGGCGTT CCGCGGGTGG GGCGCGTCCA GCTTCGCCTG GGGTGGCGTG GCGGGGGTGA TGGTCGCGCT GATCGGGTGC GGCATCGCGG CTCCCGGCTA CCTGCGTCCG GGCTGGGATC GTCAGGTCGC CCGCGAACTG GTCCGGTACG GTGCGCCGCT CGCCGGCGCG AGTCTGTTCG TGCTGGCGAC GATGAACACC GATAGCGCGG TCGTCGGCGC GACGCTCGGT CCGGTGGCGC TGGGCTTGTA TCGGGTGGCG TTCACGATGT CGAGCTGGCC GGTCCGGGCG ATCTCCGAGA CGGCACGGCG CGTGTCCTTC GCGGGATTCT CGCGCGCAGC CGTCTCCGCC CAAACGCTCA CCGACGGGTT CACCAGCGGT CTGTCCCCGC TGCTCATCGC CTCGGTCCCA GCCTGCGCAC TCCTGGCAGC GCTGCCGGGT CCGATCATCC GGTCGGTCTA CGGCGATCAG TGGACAGGCG CCGCCGGAGC CTTGCGCTAC CTGGCGATTC TCGGCTTGCT CAGGATCATC TTCGAGCTCT GTTACGACTT CATGGTCGCC GCCGGTCGCT CGCGAGCGCT CCTGACGGTC CAAGCCCTGT GGCTGGCCGC GCTGATCCCC GCGCTCATCT TCGGCGCGCA TCACAACGGG ATCAGCGGTG TCGGCGCCGG GCACATCGTG GTCGCGGCGG GCGTCATCGG ACCCGCGTAC GTCCTCACGC TGCGCGCGGT GGGCATCCAT CCGCTCCGCA TCGCGGCGGT GACGTGGCGA CCGGTGCTGG GCGGTGGTGT CGTCGTGGCG GTCGCCGTCG CGGTGAACCG CGTCGCGGGC AACTCCGATA TCGCGCTCGC TGGGGCGTGC TTCGCGGCGA TGGCTGCGTA CGTGCCGGTC GCGGTGCCGG CGTCGGCGAT GCGGCAGGTG TGGGGCAGGG TGAGTTCGCG GTTCGGTCGG CGGTCGACCG TGCTGCCGCC CTCCGTGATC GCTGATGAAC GGCTCACTTC TGGGGAGTCG GCTTCGGTTT GA
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Protein sequence | MSQSQNIPDA DSEAAPGGAP EGAPEGIPEA APESLGDRVR SAAKWSLINT LLIRIGTFAT GVILARGALT PRDWGLYAVG GVAQAVLLSF NELGVSLAVV RWDRDPRSFA PTVVTLATAS STALYVGLWF LAHDIAIMLG SPDATGVLRI LCFAVVVDGV ACVPNAVLMR EFRQRARLTI DLLTFVVSSG LTLLLAFRGW GASSFAWGGV AGVMVALIGC GIAAPGYLRP GWDRQVAREL VRYGAPLAGA SLFVLATMNT DSAVVGATLG PVALGLYRVA FTMSSWPVRA ISETARRVSF AGFSRAAVSA QTLTDGFTSG LSPLLIASVP ACALLAALPG PIIRSVYGDQ WTGAAGALRY LAILGLLRII FELCYDFMVA AGRSRALLTV QALWLAALIP ALIFGAHHNG ISGVGAGHIV VAAGVIGPAY VLTLRAVGIH PLRIAAVTWR PVLGGGVVVA VAVAVNRVAG NSDIALAGAC FAAMAAYVPV AVPASAMRQV WGRVSSRFGR RSTVLPPSVI ADERLTSGES ASV
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