Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8450 |
Symbol | |
ID | 8339830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9781282 |
End bp | 9781623 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644961537 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_003119114 |
Protein GI | 256397550 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000560985 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGACCTGA AGCTGGAGAC GCGAGACGAG AACGGCCGGA CGATCGTCAA GGTCGGCGGG GAGATCGACG TGTACACCGC CCCGAAGCTC CGGGAACAGC TGGTCGAGCT GGTCGGCGCC GGGAAGTACC ACCTGATCGT GGACATGGAG GACGTCGACT TCCTGGACTC GACCGGGCTG GGCGTCCTGG TCGGCGGGCT CAAGCGGGTC CGCGCGCACG ACGGTTCGCT GCGCCTGGTG TGCACCCAGG AGCGGATCCT GAAGATCTTC CGGATCACCG GCCTGACCAA GGTTTTCCCG ATCAGCGACA GCGTGGAGCA GGCCGTCACC GCCGTCGACT AG
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Protein sequence | MDLKLETRDE NGRTIVKVGG EIDVYTAPKL REQLVELVGA GKYHLIVDME DVDFLDSTGL GVLVGGLKRV RAHDGSLRLV CTQERILKIF RITGLTKVFP ISDSVEQAVT AVD
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