| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8412 |
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| Symbol | |
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| ID | 8339792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9739109 |
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| End bp | 9739828 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644961499 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003119076 |
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| Protein GI | 256397512 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCCAGA CCACGCCGGA ACCGACCGAA GCGCCGGGAT CCGCCGATCC CGCCGCCCCC
ATCCGCATCG TCCTGGTCGA CGACCAGGAA CTGCTGCGCA CGGGCTTCCG CATGGTCCTG
AACAGCCAGC CCGACATGGC AGTGGTCGGC GAGGCAGGCG ACGGCCAAGT CGCCCTGGAC
CTGCTCACCA GGTTGCAGGC CGACGTGGTC CTGATGGACG TCCGCATGCC CCGCCTCGAC
GGCGTCGCCG CCACCCGCGA GATCGTGGTC CGCGGCGAAC GTCCCCGAGT CCTGATGCTC
ACCACTTTCG ACCTCGACGA GTACGCCTTC ACAGCCCTCA AAGCAGGCGC CAGCGGCTTC
CTCCTCAAGG ACGTCCCACC CCCGGACCTC CTCGCCGCCA TCCGCGCCGT CCACAGCGGC
GAGGCAGTGG TCGCCCCCTC CACCACCCGC CGCCTCCTCG ACAAGTTCGC CCCGATGCTC
CCCTCCGAGA GCGAACCCGC CCCACCGGAA CTGACCGTCC TGACCGACCG CGAGCACGAG
GTCCTGCTCC TGGTCGCGCA AGGCATGTCC AACGCCGAGA TCGCCGGCAA ACTGTTCCTG
TCCGAGGCCA CGGTGAAGAC CCACGTCGGC CGCATCCTGA TGAAGCTCGG CCTCCGCGAC
CGCGTCCAGG CCGTGGTGCT GGCCTACGAG ACCGGGCTGG TGAAGGCGCG GGGACGGTAG
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| Protein sequence | MSQTTPEPTE APGSADPAAP IRIVLVDDQE LLRTGFRMVL NSQPDMAVVG EAGDGQVALD
LLTRLQADVV LMDVRMPRLD GVAATREIVV RGERPRVLML TTFDLDEYAF TALKAGASGF
LLKDVPPPDL LAAIRAVHSG EAVVAPSTTR RLLDKFAPML PSESEPAPPE LTVLTDREHE
VLLLVAQGMS NAEIAGKLFL SEATVKTHVG RILMKLGLRD RVQAVVLAYE TGLVKARGR
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