Gene Caci_8411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8411 
Symbol 
ID8339791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9737668 
End bp9739059 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content67% 
IMG OID644961498 
ProductXanthine/uracil/vitamin C permease 
Protein accessionYP_003119075 
Protein GI256397511 
COG category[R] General function prediction only 
COG ID[COG2252] Permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGTCC TGGAACGCGT CTTCAAGGTG CACGAGCGGG GATCGTCGTA CGTCCGCGAG 
GTCCGCGGCG GTTTGGCCAC GTTCTTCACC ATGGCCTACA TCCTGGTGCT GAACCCGATC
ATCCTGGGCG GGACGAAGGA CAAGTTCGGC CACGTCCTGA GCCACACCCA GCTGGTCACC
TCCACCGCGG TGGTGGCCGG CGTGATGACC CTGATCATGG GCATCGGCGG CAACCTGCCG
CTGGCCATCG CCGCCGGGCT CGGGCTGAAC GGCGTGGTGG CCTTCACCCT GGCGCCGACC
ATGTCCTGGC CGGACGCGAT GGGCCTGGTG GTGCTGGAAG GGCTCGGCAT CTGCCTGCTG
GTGGTCACCG GCTTCCGGCA GAAGATCATG GACGCCATCC CGCTGGCCCT GAAAAAGGCG
ATCGGCGTCG GCATCGGGCT GTTCATCGCC TTCATCGGCC TGGTCGACGC CGGCTTCGTC
GGCGCGGGCT CGGGAACGCC GGTCACCCTC GGCGCCGGCG GCACGCTCAA GGGCTGGCCG
ATGTTCGTGT TCTGCGTCGG CGTCTTGCTC ACGCTGTCCC TGCTGGTGCG GCGGGTCCCC
GGCGGACTGC TGATCTCGAT CGTCACCACC ACGGTGCTGG CCATCGTGGT CAACAAGATC
GCCACCGTCC CGGACAAGGA CTGGGGCACC ATCGCCCCGA AGGTCCCCCA CGGTGTGGTC
GCGCACCCGG ACTTCGGACT GCTCGGCAAA TTCAGCCTGT TCGGCGGCTT CCACCATGCC
GGCGTGATGA CCGCGATCGT GTTCGTCTTC ACGCTGATCC TCGCCGACTT CTTCGACGCG
ATGGGCACCA TCATCGGCAT CAGCGGCGAA GCGGGCCTGC TCGACGAGGA CGGCCGGCTC
CCCGGCATCG GCCGTGTCCT GTTCATCGAC GGCCTGGCCG CCTCAGCCGG CGGCGCGGGC
TCGGCCTCCT CCAACACCTG CTTCGTGGAA TCGGCCGCGG GCGTCGGCGA AGGCGCGCGC
ACTGGCTTGG CGAACGTCAT CACCGGCGCG CTGCTGTTCC TGGCCGCGTT CCTGACCCCG
GTGCTGACCA TCGTGCCGTC CCAGGCGGCG GCACCGGCGC TGGTCGCCGT CGGATTCCTG
ATGATGACCC AGGTGAAGGA CGTCGACTGG GACGACTGGG AGATCGCAGT CCCGGCCTTC
CTGACCATCG CACTGATGCC GTTCACCTAC AGCATCACCA ACGGGATCGG CGCGGGCTTC
ATCCTGTTCT GCGTGCTGAA GGTGGTGCTC GGCAAGGCAC GCGACGTGAA CTGGCTGATG
TGGATCGTCG CGGCGTTCTT CGTGGTGTAC TTCGCGCTGG ATCCGATCAA GCAGGCGCTG
GGGATCGAGT AG
 
Protein sequence
MGVLERVFKV HERGSSYVRE VRGGLATFFT MAYILVLNPI ILGGTKDKFG HVLSHTQLVT 
STAVVAGVMT LIMGIGGNLP LAIAAGLGLN GVVAFTLAPT MSWPDAMGLV VLEGLGICLL
VVTGFRQKIM DAIPLALKKA IGVGIGLFIA FIGLVDAGFV GAGSGTPVTL GAGGTLKGWP
MFVFCVGVLL TLSLLVRRVP GGLLISIVTT TVLAIVVNKI ATVPDKDWGT IAPKVPHGVV
AHPDFGLLGK FSLFGGFHHA GVMTAIVFVF TLILADFFDA MGTIIGISGE AGLLDEDGRL
PGIGRVLFID GLAASAGGAG SASSNTCFVE SAAGVGEGAR TGLANVITGA LLFLAAFLTP
VLTIVPSQAA APALVAVGFL MMTQVKDVDW DDWEIAVPAF LTIALMPFTY SITNGIGAGF
ILFCVLKVVL GKARDVNWLM WIVAAFFVVY FALDPIKQAL GIE