| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8399 |
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| Symbol | |
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| ID | 8339779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9725698 |
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| End bp | 9728403 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644961486 |
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| Product | thymidylate kinase |
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| Protein accession | YP_003119063 |
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| Protein GI | 256397499 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0125] Thymidylate kinase |
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| TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTCAT CACAGGTCGG GATCCGCGAG GTGCTCGCCA TCCCCGACTT CCGCCGGCTG
TGGACGGCTC TGTCGCTGTC CAGCCTCGGC GACTGGCTCG GGCTGCTGGC CCAGTCCTCG
CTGGCGGCGT CCCTGGCCGG AGGCGGGTAC GCCGGGCGCT CCTACGCGGT CGCCGGCGTC
TTCGTGGTCC GGCTGATCCC GGCCGTGCTG TTCGGGCCGA TCGCCGGGGT GGTCGCCGAC
CGGCTGGACC GGCGCTGGAC GATGGTGGCC GGGGACAGCG CGCGCTGCCT GTTCTTCATC
TCCATCCCCC TGGTCGGCTC CCTATGGTGG CTGTTCACCG CGACCTTCCT GATCGAGATC
GCGGCGATGT TCTGGATCCC GGCCAAGGAG GCGACGGTCC CGAACCTGGT CCCGCCGCGG
CTGCTGGAGT CGGCGAACCA GGTCTCACTG CTCACCGCCT ATGGCACCGC TCCTATCGCG
GCCGGCGTGT TCACCGTCCT GTCGCTGATC ACGCGCGCAC TAGCCGACCA GTGGACCTTC
TTCACCGCCA AACCGGTCAG CCTCGCCCTC TACTTCGACG CACTGACCTT CCTGTTCTCC
GCCCTGACTA TCGCGCGCCT AAGGACCATC CCCGCGCGGT CCGCGACAGA GCGCGCAGCG
GAGCGCCGCC ACACCACCGA CAACCGCTCC GTGCTCCGCA CCCTCTTCGA CGGCTGGCAC
TACCTCGGGG AGGACAGGCG GATCCGCGGT GTGATCATCG GCACAACCGG AGCCTTCGCG
GCCGGCGGCG CGGTGGTCGG GCTGGCCCGG ACCTACGTCG GCGACCTGCA CGCGGGTCAG
GCGGCGTACG GCGTCCTGTT CGGCACGGTC TTCCTCGGCC TGGCCGCGGG GATGTTCACC
GGGTCGCGGG TGCTCGCGGG GGTGTCGCGG GAGCGGCTGT TCGGCTCGGT GATCTTCGCC
GCCGGGATCG TGCTCTGCGT GTTCGCGCTG GTGCCGATCC TGCTGCTCAG CGTGCTGTGC
GCGCTCGTGA TCGGCTTCCT CGGCGGGACC GCGTGGATCA TCGGGCAGAC GATGCTGGGC
CGCGAGGTGG CCGACGAGCT GCGCGGCCGG ACGTTCGCCT TCGTCCAGTC GCTGATCCGG
GTGACGCTGG TCCTGATCCT GGCCGTGTCC CCGGCGGTGG CCGGAGTGTT CGGCGCGCAC
ACGCTAAGCG TTCCCGGCGT GTCGATCACC TATGGTGGCG CGGCCATCAC CCTTTTCGGC
GCGGGATTGC TCGCGATGGG CGTCGGGTGG GTGGCGTACA GGATGATGGA TGACGTGCCA
GGGAAATCGT TGCGGAACGA ACTGAAGGCG GCGCTTAAGC GCTCCGCCGC TCCGACGCGC
GCCGGGGGCG CTGCGGAGAC GGGGACCTCC TCCGGACCGG CGGTCGCAGC CGCCGGGAAC
CCGCTGCCGG AAGACACCGG GATCGAAAGG CCCGCACACG CCTACACCGG TACCTTCCTG
TCCTTCGAGG GCGGCGACGG CAGCGGCAAG TCCACGCAGC TGGACCTGCT CGCCGACTGG
CTGCGCGGGA GCGGCCACGA GGTGGTGGTC ACCCGGGAGC CCGGGGGGAC GCCGCTGGGC
ACCAAGCTGC GGAACATCGT GCTGGACGCG CACAACGCCG ACGTCATCTC CCCGCGCGCC
GAGGCGCTGA TCTACGCCGC GGACCGCGCC GACCACGTCG AGCGGGTGGT CCGGCCGGCG
CTGGAGCGCG GGGCGGTGGT GATCACCGAC CGCTACGTCG ACTCCTCCCT GGCGTATCAG
GGCGCGGGCC GCGCGCTGTC AGCCCGGGAG GTCGAGCTGT TGTCGCAGTG GGCCACGCAG
GGCCTGATGC CGGACGTCAC GATCCTGATG GACCTGGACC CGCTCGAGGC CGCGCGGCGC
CGCAAGACCC CGGCCGACCG GCTGGAGCTG GAGTCCGTGG ACTTCCACCG CCGGGTCCGC
AACCGCTACC TGGAGCTGGC CACGGCCGAG CCGGAGCGGT TCATCGTGAT CAACGCCATG
GAGCCGATCG AGCAGATCGC CGGACGCATC CGGGCCCGGC TGGAGGGCCG GATCCACCTG
TCGAGCCAGC AGCGGAGTGA GGAAGCGGAG CGGCGCGAGG CAGAGCGGCG TAAGGCCGCT
GCGGAGCGCG CCGTACAGAT GGCAGAGCTC TCCGACGCGG AGCGCCGCCG GGCCGAGATC
GAAGCCGAAC AGCGGGACCA GGCGCAGCGC GAGCAGGAGG CGCGGGAGGC CGCGAGCCAG
GAGCACCGGC GGCGCTTGGA GGAGGACGCG GCCAGGGCGG AGCGGGCGGC GCGCGAGCGG
GTACAAGGCG CCGGCGACCT GTCCTCGCGG CTGGCGCCGA GCGACCGACC GACGACTCGG
CCGACGGCTC GACCGCCGGA GCGCGCAGCC GACACGCCGA CGACGCGCTC TGCCACGCCC
ACTCCCCCGC CTTCGGCCAA GCCTCCGACT TCGGCAAAGC CTCCGACCTC GCCCTCCGGT
TCGACTCCGA CCTCGATGTC CCACGCCGAG GAGATCACAG CGCCTCCCGT CCGCAGCGAA
TGGGAAGTCC CGGACTACGT CGCGCAGCCG GAGTTCGACG ACGAGCCGGA GCAGGACGCG
ATGTCGATGG CGGACGAGCT GTTCGGAGCC CACCACAGGT CACGGCGCGG CGGTGACGAC
GCATGA
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| Protein sequence | MESSQVGIRE VLAIPDFRRL WTALSLSSLG DWLGLLAQSS LAASLAGGGY AGRSYAVAGV
FVVRLIPAVL FGPIAGVVAD RLDRRWTMVA GDSARCLFFI SIPLVGSLWW LFTATFLIEI
AAMFWIPAKE ATVPNLVPPR LLESANQVSL LTAYGTAPIA AGVFTVLSLI TRALADQWTF
FTAKPVSLAL YFDALTFLFS ALTIARLRTI PARSATERAA ERRHTTDNRS VLRTLFDGWH
YLGEDRRIRG VIIGTTGAFA AGGAVVGLAR TYVGDLHAGQ AAYGVLFGTV FLGLAAGMFT
GSRVLAGVSR ERLFGSVIFA AGIVLCVFAL VPILLLSVLC ALVIGFLGGT AWIIGQTMLG
REVADELRGR TFAFVQSLIR VTLVLILAVS PAVAGVFGAH TLSVPGVSIT YGGAAITLFG
AGLLAMGVGW VAYRMMDDVP GKSLRNELKA ALKRSAAPTR AGGAAETGTS SGPAVAAAGN
PLPEDTGIER PAHAYTGTFL SFEGGDGSGK STQLDLLADW LRGSGHEVVV TREPGGTPLG
TKLRNIVLDA HNADVISPRA EALIYAADRA DHVERVVRPA LERGAVVITD RYVDSSLAYQ
GAGRALSARE VELLSQWATQ GLMPDVTILM DLDPLEAARR RKTPADRLEL ESVDFHRRVR
NRYLELATAE PERFIVINAM EPIEQIAGRI RARLEGRIHL SSQQRSEEAE RREAERRKAA
AERAVQMAEL SDAERRRAEI EAEQRDQAQR EQEAREAASQ EHRRRLEEDA ARAERAARER
VQGAGDLSSR LAPSDRPTTR PTARPPERAA DTPTTRSATP TPPPSAKPPT SAKPPTSPSG
STPTSMSHAE EITAPPVRSE WEVPDYVAQP EFDDEPEQDA MSMADELFGA HHRSRRGGDD
A
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