Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8354 |
Symbol | |
ID | 8339733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9678483 |
End bp | 9679412 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644961440 |
Product | Proline dehydrogenase |
Protein accession | YP_003119018 |
Protein GI | 256397454 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTGCGTC GGACGTTGCT GGCGGCGGCG GGCAGTGATC GCACTCGCGC CCTGGTCGAG CGGTCCCCTG GATCGCGCCA GGTGGTGAAG CGCTACGTCG CCGGTCCCGC CACCGACGAC GCGGTCGCCG TGGCCGACGC CCTGATCGAG GACGGCCTGC TGGCCACACT GGACCATCTG GGCGAGGACA CCACCGACGC CAACCAGGCG ATCCTGGTCA AGGAGGCGTA CCTGCTCCTG CTGGAGCGGC TGGCGGCGGC CGGGCTGACC CCGCACGCCG AGGTCTCGGT GAAGCTCTCG GCCATCGGCC AGTCGCTGAG CAGCGACGGG GAGAAGATAG CCCTCGAGCA CGCGCACGCG ATCTGTGAAG GCGCGCAGCG CGCCGGGACG ACGGTCACCT TCGACATGGA GGACCACAGC ACCACCGACT CGACCCTGAA GATAGTGGCC GAGCTGCGGC GGGACTATCC GTGGGCGGGC ATCGTGCTGC AGGCGTACCT GCGCCGGACC GAGGCGGACT GCAAGGACTT CGCGACCCCG GGATCCCGGG TGCGGCTGTG CAAGGGCGCC TACCGCGAGC CGGAATCGGT GGCGTACCAG ACGACCCAGG ACGTGGACCT GTCCTTCGTC CGCTGCATGC GCACTCTGAT GGCCGGCGAG GGCTACCCGA TGCTGGCCAC CCACGACCCG CGGCTGATCG AGATAGGCGG CGCGCTGGCC GTCCGCAACG GCCGCGGCAT CGGCAGCTAT GAGTTCCAGA TGCTCTTCGG CGTCCGGCCG CACGAGCAGA AGCGCTTAGC CTCCGCCGGC GAACGCATGC GGGTGTACGT GCCGTACGGA AGCGAGTGGT ACGGCTACCT CATGCGACGA TTGGCGGAGC GCCCGGCGAA TCTCGGCTTC TTCGCGCGGT CGCTGCTCTC GAAAGACTGA
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Protein sequence | MLRRTLLAAA GSDRTRALVE RSPGSRQVVK RYVAGPATDD AVAVADALIE DGLLATLDHL GEDTTDANQA ILVKEAYLLL LERLAAAGLT PHAEVSVKLS AIGQSLSSDG EKIALEHAHA ICEGAQRAGT TVTFDMEDHS TTDSTLKIVA ELRRDYPWAG IVLQAYLRRT EADCKDFATP GSRVRLCKGA YREPESVAYQ TTQDVDLSFV RCMRTLMAGE GYPMLATHDP RLIEIGGALA VRNGRGIGSY EFQMLFGVRP HEQKRLASAG ERMRVYVPYG SEWYGYLMRR LAERPANLGF FARSLLSKD
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