| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8330 |
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| Symbol | |
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| ID | 8339709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9655895 |
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| End bp | 9656743 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644961416 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003118994 |
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| Protein GI | 256397430 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02952] RNA polymerase sigma-70 factor, TIGR02952 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00407021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTACCGGG ACAACTTCGG ACTCAACGGA TACAGCGCGA AGGTGGGGGG CGACCCGTTC
GCCGGCACCG GCTCGCTGTC CACGCAGGTG CTGTCCACGC ACGTGCCCAT GCCGTCGTCG
GCGTCGCTGC TGGACCGCCA GGAGCGCGGC CTGCTCATGC TGCGCGAGGC CATCCGGGTC
GTGGCCGGGG ACGGCACGGG GCGCGGCGCG CACGCCGCGG GCACCCGCTC CGGCGGCGCC
CGGCACGGCG GCGGCTCGGG CACCGCGGAC CGCTCCGGCG GCCCGGTCGC CGGCGACGGC
GAGTCCGAGG CGATGGTGCA CCTGGTCCGC CAGGCGCAGG AGGGCAGCGC CGACGCCTTC
GGCGAGCTCT ACCGCATCTA CTGCGACACG GTCTTCCGGT ACATCTACTA CCGCGTGTCG
ACCCGGGCCC TGGCCGAGGA CCTCACCAGC GAGACCTTCG TCCGCGCGCT GCGCCGCATC
ACCACCTTCA GCTGGCAGGG CCGGGACTTC GGGGCGTGGC TGGTGACCAT CGCCCGCAAC
CTGGTCGCCG ACCACTTCAA GTCCAGCCGG CACCGCATGG AGGTCTCCAC CGGGGAGATG
CTCGACTCCA ACGAGGTCGA GGCCTCCCCG GAGGACTCGG TGCTGGAGCA CCTGTCCAAC
GAGGCCCTGC TGCACGCCGT CCACCGGCTC AACGACCAGC AGCGCGAGTG CGTCACGCTC
CGCTTCCTGC AGGGGCTCTC GGTGGCCGAG ACCGCCGACA TCATGGGCAA GAACGAGGGC
GCGATCAAGA CCCTGCAGTA CCGCGCGGTC CGCACGCTCG CCCGACTCCT GCCGGCCGAG
GCCCTCTGA
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| Protein sequence | MYRDNFGLNG YSAKVGGDPF AGTGSLSTQV LSTHVPMPSS ASLLDRQERG LLMLREAIRV
VAGDGTGRGA HAAGTRSGGA RHGGGSGTAD RSGGPVAGDG ESEAMVHLVR QAQEGSADAF
GELYRIYCDT VFRYIYYRVS TRALAEDLTS ETFVRALRRI TTFSWQGRDF GAWLVTIARN
LVADHFKSSR HRMEVSTGEM LDSNEVEASP EDSVLEHLSN EALLHAVHRL NDQQRECVTL
RFLQGLSVAE TADIMGKNEG AIKTLQYRAV RTLARLLPAE AL
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