| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8327 |
|---|
| Symbol | |
|---|
| ID | 8339706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9653223 |
|---|
| End bp | 9654062 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644961413 |
|---|
| Product | redox-sensing transcriptional repressor Rex |
|---|
| Protein accession | YP_003118991 |
|---|
| Protein GI | 256397427 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2344] AT-rich DNA-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.670988 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.432921 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCAGCA CGAGCAGCAA CGCGTCGGGC GGCACAGGTC CGGACTCCCG TTCCGGAAAC
GGATCCTCGC TGCGTTCCCA CCGGCAGGGC ATCCCGGAGG CCACGGTCGC GCGGCTCCCG
GTCTACCTGC GGGCCCTGAT CAGCATGCAG GAGCGCGGGA TCATCACCGT CTCCAGCGAA
GAGCTGGCAG CCTCCGCGGG CGTCAACTCC GCCAAACTCC GCAAGGACTT CTCCTACCTC
GGCTCCTACG GGACGCGCGG GGTGGGCTAT GAGGTCTCCT TCCTCGTCTA CCAGATCTCC
CGGGAACTCG GGCTGACCCA GGACTGGGCC GTGGCCATCA TCGGCATCGG CAACCTGGGC
CACGCGCTGG CCAACTACGG AGGGTTCGCC TCGCGCGGCT TCCGGGTGGC GGCCCTGTTC
GACGCCGACC CCGCCCTCAC CGGCTCGGTG GTGGCCGGGG TGCGCGTCCG GCATGCGGAC
GAACTGGAAT CGGCGATCCG CGGCCTTGGA ATCTCGATCT TCGTGATCTC CACCCCCGCG
CCCGCCGCCC AGCCCGTCGC CGACCGGCTG GTCGCGGCCG GGATCACCTC GATCCTGAAC
TTCGCGCCGG TGGTCTTGAA CGTGCCCGAG GGAGTGGACG TGCGCAAGGT GGACCTGTCC
ATCGAGCTGC AGATCCTCGC CTTCCATGAG CAGCGCAAGG GCGGGCACGC GCTGCCGCAG
GCCGGGGCGG ACCCGGCGGC TCCCGACGGC GGCGGGAAGA CCGCCGGCGG ACCGGCCGCG
GCGTCCCCCG ACCGTTCAGA GCTCGACTCC TCCTTGATCG ACACCGGGAT TCCCTCGTGA
|
|---|
| Protein sequence | MASTSSNASG GTGPDSRSGN GSSLRSHRQG IPEATVARLP VYLRALISMQ ERGIITVSSE
ELAASAGVNS AKLRKDFSYL GSYGTRGVGY EVSFLVYQIS RELGLTQDWA VAIIGIGNLG
HALANYGGFA SRGFRVAALF DADPALTGSV VAGVRVRHAD ELESAIRGLG ISIFVISTPA
PAAQPVADRL VAAGITSILN FAPVVLNVPE GVDVRKVDLS IELQILAFHE QRKGGHALPQ
AGADPAAPDG GGKTAGGPAA ASPDRSELDS SLIDTGIPS
|
|---|
| |