| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8315 |
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| Symbol | |
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| ID | 8339694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9636708 |
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| End bp | 9638843 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644961401 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_003118979 |
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| Protein GI | 256397415 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
[TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.718859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGGA ATCTGCTGCT GACCGACGCC TCCGGGCGCC CCGCCGACCC GGCGCCGTCC
GGCTCCCCGC TGCTGTCCGT CCAGGACCTG CACGTCACCT TCGGCTCCGA GGCCGGGGAC
GTGCGCGCGG TGCGCGGCGT CAGCTACGAC CTGTACCCGG GCGAAGTGCT GGGCATCGTC
GGCGAGTCCG GCTCCGGCAA GTCCGTGTCC TCCATGGCGA TCCTGGGCCT GCTGCCGGAC
AACGCCCGCG TCACCGGCTC GGTGAAGCTC GAGGGCCGGG AACTGCTGGG TCTGAACGAC
AGGCAGATGT CGAAGATCCG CGGCAAGGAC ATCGCGATGG TCTTCCAGGA CCCGCTGTCC
GCGCTGACCC CGGTGTTCAC CGTCGGCGAC CAGATCGTCG AGGCGCTGAC CGTGCACCAG
AAGCTGTCCC GGGACGCCGC GCGCAAGCGT GCCCTGGAGC TGCTCGACGT GGTCGGCATC
CCGGACCCGC AGCGGCGTTT CAAGAACTTC CCGCACGAGT TCTCCGGCGG CATGCGCCAG
CGCGTGATGA TCGCCATGGC GATCGCCAAC GACCCCAAGG TGATCCTCTG CGACGAGCCG
ACGACCGCGC TCGACGTGAC CATCCAGGCG CAGATCCTGG AGGCGCTGAA GAACGCCCAG
GAGCTCACCG GCGCGGCGAT CCTGATGATC ACCCACGACC TCGGCGTGGT CGCCGGGTTC
GCCGACAAGG TCGCGGTGAT GTACGCCGGC CGCCCGGTCG AGCAGGGCGC CGTCGACGAG
ATCTACTACA GCCCGCGCAT GCCGTACACC ATCGGCCTGC TCGGCTCGAT CCCGCGCCTG
GACGGCGGCG CCGAGCAGGG CCGCCGGCCG CTGACCCCGA TCGAGGGCAA CCCGCCGTCG
ATGGTCGGGC TGCCGGACGC CTGCCCCTTC GCCGACCGCT GCCCGATCGC GACCGACATC
TGCCGGGACT CCGAGCCCGA GCTGCTGCCG ACCGGCGGCA ACGCGCACCT GTCGGCCTGC
CACCGCCGCG CCGACCTGCA GAGCGGGACC ATCCCGATCG GCGAGGTCTA CCCGATCCCG
GACATCCCGG CGGCGGAGCT GGACACCGTG CCGCGCGAGC AGCGCGAGCC GGTGCTGGCG
GTGACCGGGC TGCAGAAGCA CTTCCCGTTG CTGCGCGGCG CGGTGTTCAA GCGGCGCGTC
GGCACGGTCA AGGCCGTGGA CGGCATCGAC TTCGAGATCC GCGAGGGCGA GACCCTGGGC
CTGGTCGGGG AGTCCGGCTG CGGCAAGACC ACGACGCTGC TGGAGATCCT GGAGCTGGTG
GCTCCGCAGG CCGGCTCGAT CGCGGTGTTC GGCCGCGAGG CGGCGAACCT GTCCGGGCGC
GAGCGCATGG AGATGCGCAA GGACATCCAG ATCGTGTTCC AGGACCCGAT GGCGTCGCTG
GACCCGCGGA TGCCGGTCGG AGAGGCCATC GCAGAGCCCT TGCGCACCCA CGGCTGGTCC
GCGGACAAGG CGGCGGCGCG GGTGAGGGAG CTGCTGGAGC TGGTCGGCCT GGAGCCGTAC
CACGCCTCGC GCTTCCCCCG GGAGTTCTCC GGCGGCCAGC GGCAGCGCAT CTGCGTGGCC
CGGGCGCTGG CGCTGAACCC GAAGGTCGTC ATCCTGGACG AGCCGGTCTC GGCGCTGGAC
GTGTCGATCC AGGCCGGCGT CATCAACCTG CTCGACGAGC TGCGGGCCAA GCTGGGCCTG
AGCTACCTGT TCGTGGCGCA CGACCTGTCG GTGGTCCGGC ACATCGCCGA CCGGGTGGCC
GTGATGTACC TGGGGCGGAT CGTCGAGATC GGCGACGTGT CCTCGGTCTT CCACGCGCCT
TCGCACCCTT ACACCCAGGC GCTGCTCTCC GCGATCCCGC TGCCGGACCC GCGCCGGGAG
CGCGAGCGCT CGCGGATCCT GCTCCCCGGC GACCTGCCCT CGCCGGCGAA CGTGCCCTCC
GGCTGCCGGT TCCGCGACCG CTGCTTCAAG TACGCGTCGC TGGACGCCGC CGAGCAGAGC
AGATGCCGCG ACGAGGACCC GGTCATCCTG CCGCGTCCCG GCAAGGCGGA CCACGCCGCG
GCGTGCCACT ACGCGGACGC GCTGCAAGTG GTCTGA
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| Protein sequence | MSRNLLLTDA SGRPADPAPS GSPLLSVQDL HVTFGSEAGD VRAVRGVSYD LYPGEVLGIV
GESGSGKSVS SMAILGLLPD NARVTGSVKL EGRELLGLND RQMSKIRGKD IAMVFQDPLS
ALTPVFTVGD QIVEALTVHQ KLSRDAARKR ALELLDVVGI PDPQRRFKNF PHEFSGGMRQ
RVMIAMAIAN DPKVILCDEP TTALDVTIQA QILEALKNAQ ELTGAAILMI THDLGVVAGF
ADKVAVMYAG RPVEQGAVDE IYYSPRMPYT IGLLGSIPRL DGGAEQGRRP LTPIEGNPPS
MVGLPDACPF ADRCPIATDI CRDSEPELLP TGGNAHLSAC HRRADLQSGT IPIGEVYPIP
DIPAAELDTV PREQREPVLA VTGLQKHFPL LRGAVFKRRV GTVKAVDGID FEIREGETLG
LVGESGCGKT TTLLEILELV APQAGSIAVF GREAANLSGR ERMEMRKDIQ IVFQDPMASL
DPRMPVGEAI AEPLRTHGWS ADKAAARVRE LLELVGLEPY HASRFPREFS GGQRQRICVA
RALALNPKVV ILDEPVSALD VSIQAGVINL LDELRAKLGL SYLFVAHDLS VVRHIADRVA
VMYLGRIVEI GDVSSVFHAP SHPYTQALLS AIPLPDPRRE RERSRILLPG DLPSPANVPS
GCRFRDRCFK YASLDAAEQS RCRDEDPVIL PRPGKADHAA ACHYADALQV V
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