| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8298 |
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| Symbol | |
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| ID | 8339677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9614958 |
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| End bp | 9616685 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644961384 |
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| Product | hypothetical protein |
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| Protein accession | YP_003118962 |
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| Protein GI | 256397398 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.237745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGAT CGATCATGGA CTCCCTGACC GAGGGCTTCG CCTCGGTGAT CTTCGGCAAG
GTCGAGACCG CCCGCCCCCC GGTGCGCACC TCTTCCTCGC AGGCGCAGGC CGTGTACCTG
CCGACCGCGG CGCCCGGCCT GGGCGACTCC GGCGTCATCA TCGGCCGCGA GGTCTACTCC
GGCAAGGGCT ACGTCTACGA CCCCTTCCAG CTCTACGGCC AGCAGCTGCC GGCGCCGCAC
TGGCTGGTGC TCGGCGAGTC CGGCAACGGC AAGTCGGCGC TGGAGAAGAC CTACGTCCTG
CGCCAGCTGC GCTTCAAGGA CCGCCAGGTG GTGGTGCTGG ACGCCCAAGG CGAGGACGGC
GTCGGCGAGT GGCACCTGAT CGCCGAATCC CTCGGCGTCA CCCCGGTCCG CCTGGACCCG
CACGGCGTGC GCGGCGACAG CATCCGGCTC AACCCGCTGG ACCCGGCGAT CACCTCCACC
GGGCAGCTCG CGCTGCTGCG GACGATAGTC GAGGTCGCCC AGGGCCGGCC GCTGGACGAG
CGCGCCGGCT ACGCGCTGAA GGCGGCGCAC CTGCGCGTCG GCGAGGCGGG GCTCCACTAC
GGCCGCCAGC CGATCCTCTC GGACGTGGTC GAGGCCCTGC GCACGCCGCT GACCAGCGCC
GCCGAGGACA TGAACGTGAC GATAGAGGAC GTGCAGGCCT GGGGTCTGGA CGTCGCGCTG
GTCCTGGACC GGCTGGTCGA CGGCGACCTG GCGGGCATGT TCGACGGGCC CACCACCTCC
GGCATCGACC TGGACTCCCC GCTGATCGTC TTCGACCTGT CGGCCATCGA CCGCAACTCG
ATCGGCATGC CGATCCTGAT GGCCATCGTC GGCGTCTGGC TGGAGCACAC CTGGCTGCGC
CCCGACCGCG TGAAGCGCAT CCTGCTGGTC GAAGAGGCCT GGCACATCAT CAACTCGCCC
TTCGTGGCCC AGCTGTTCCA GCGCCTGCTG AAGTTCGGCC GCCGCCTGGG CCTGTCCTTC
GTCGCGGTGG TCCACCACCT GTCCGACGTG GTGGACGGCG CCGCGGCGCG CGAGGCGGCG
GCGATCCTGA AGATGGCCTC CACCCGCACG GTGTACATGC AGAAAGCCGA CGAGGCGAGA
ACCACCGGCA AGGTGTTGGG ATTGCCCCGC TGGGCGGTCG AGATCATCCC GTCGCTGACG
CCCGGCATCG CCGTATGGGA CGTGAACGGC GACGTCCAGG TGGTCAAGCA CATCGTCACC
GAGCACGAAC GCCCGCTGGT CTTCACCGAC CGCGCCATGA CCGAGACCTC CGCCGACGCC
GCGCTGATCG CCAGCGCCGC AGCAGCCGCG CTGACGGCCG GAACGGCCGA GGAGACGGCA
GAACTCGAGG CGGCCGAAGC CGAGCGGCTG GCGGCGCTCC CAGCGCCCGC GGCGCCGGTG
CGAGCGATCG CCGCCGGGAA CCAGCAGACC CTCGACCGCG AGCGCCGGTG GGCCGTGGAG
CCGATCGACG AGGACGACGA CGAGCTGACC GCCATCGCCG GGACCCTGTT CGGCAAGAAG
GCCGAGCTGC CGTATCAGTC GGCTGCGGAT ACGCCGTATC AGCCGGCTGC GGAGACGCCG
TACCAGTCGG CTGCGGAGAC GCCGTACCAG TCGGCTGCGG AGACACCGGA GCAGATCTGG
ACCGGCAGGG CTCCGAAGCC GGTGTCAGGG CCGGACGTGG ACTTCTAG
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| Protein sequence | MARSIMDSLT EGFASVIFGK VETARPPVRT SSSQAQAVYL PTAAPGLGDS GVIIGREVYS
GKGYVYDPFQ LYGQQLPAPH WLVLGESGNG KSALEKTYVL RQLRFKDRQV VVLDAQGEDG
VGEWHLIAES LGVTPVRLDP HGVRGDSIRL NPLDPAITST GQLALLRTIV EVAQGRPLDE
RAGYALKAAH LRVGEAGLHY GRQPILSDVV EALRTPLTSA AEDMNVTIED VQAWGLDVAL
VLDRLVDGDL AGMFDGPTTS GIDLDSPLIV FDLSAIDRNS IGMPILMAIV GVWLEHTWLR
PDRVKRILLV EEAWHIINSP FVAQLFQRLL KFGRRLGLSF VAVVHHLSDV VDGAAAREAA
AILKMASTRT VYMQKADEAR TTGKVLGLPR WAVEIIPSLT PGIAVWDVNG DVQVVKHIVT
EHERPLVFTD RAMTETSADA ALIASAAAAA LTAGTAEETA ELEAAEAERL AALPAPAAPV
RAIAAGNQQT LDRERRWAVE PIDEDDDELT AIAGTLFGKK AELPYQSAAD TPYQPAAETP
YQSAAETPYQ SAAETPEQIW TGRAPKPVSG PDVDF
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