Gene Caci_8242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8242 
Symbol 
ID8339621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9554322 
End bp9554756 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content67% 
IMG OID644961328 
Productferric uptake regulator, Fur family 
Protein accessionYP_003118906 
Protein GI256397342 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.824785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCG CGCCCACGGA CCTGACGAAG GAGCTGCGCG CAAAGGGCTA TCGCCTTACA 
CCGCAGCGTC AGTTCGTCCT GCAGGCCGTG GCTAACCTGG ACCATGCCAC TCCCGACGCC
ATCTGCGAAG AGGTCCGCCG TACCGCGCGC GGCGTGAACC TGTCCACGGT GTACCGCACC
CTGGAGCTCC TTGAGGAGCT GGGCCTGGTG ACGCATACGC ACCTCGGCCA CGGCGCGCAG
ATCTATCACA CTGCTGACCA GCCGGCGCAT GTGCACCTGG TGTGCCGCGG CTGCGGACGC
ATTCTGGAGG CCGCCGACTC CGCTGCCGAG CCTTTGGTGC AGCGGTTGCT GGAGGACTAC
GGGTTCCAGA CGGATGTGCG GCACCTCGCG GTGTTCGGGA TGTGTGCCGA GTGCCGGTCG
CGCGAGCAGG AGTAG
 
Protein sequence
METAPTDLTK ELRAKGYRLT PQRQFVLQAV ANLDHATPDA ICEEVRRTAR GVNLSTVYRT 
LELLEELGLV THTHLGHGAQ IYHTADQPAH VHLVCRGCGR ILEAADSAAE PLVQRLLEDY
GFQTDVRHLA VFGMCAECRS REQE