Gene Caci_8199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8199 
Symbol 
ID8339578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9510483 
End bp9511163 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content72% 
IMG OID644961285 
Productresponse regulator receiver and unknown domain protein 
Protein accessionYP_003118863 
Protein GI256397299 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4565] Response regulator of citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGCA CTCTGGTGGT GGAAGACGAT CCGGTGCTCG CCGAAGCGCA TCGGGTCTAC 
GTGGAGCGGG TTCCCGGCTT CGAGGTCGCG GACGTCGCGC GGACCGGCGC CGACGCGTTG
CGGGTGCTGG CGGCGCGGGA CGTGGACCTG GTGCTGCTGG ACGTGTATCT GCCGGACATG
ACCGGGATCG ATCTGTGCCG CACGCTGCGC GCCCGGGGCG AGGCGACCGA CGTGATCGCG
GTGACCTCGG CGCGGGATCT GGCGACGGTC CGGGCGGCGG TGTCGCTGGG GATCGTGCAG
TACCTGATCA AACCGTTCCA GTTCGCGACG TTCCGGGGCC GTCTGGAGGC CTACGCCGAG
TTCCGCCGCG CCACCGAGTC CGCCGACGCC AACTCCGGCG CGCTGCAGCA GGACGAGCTG
GACCGGATGC TCGACGGGCT GCGGTCCCCG CGTCCGGCAC AGCTGCCGAG GGGACTGTCG
GACAGCACGC TGGCCGCGCT CGTCGGGATC CTCAAGGCGG CCTCGCCGCT GACCGCCGCC
GAACTCGCCG ACCGCGCCGG GGTCAGCGCG CCGACCACGC GGCGCTATCT CGAATACCTG
ACAGCGCGCC GGCTGGTCTC GGGACAGCCG CGCTACGGCG GGCCCGGGCG TCCGGAAACC
GTCTACCAGT GGTCCGGCTG A
 
Protein sequence
MIRTLVVEDD PVLAEAHRVY VERVPGFEVA DVARTGADAL RVLAARDVDL VLLDVYLPDM 
TGIDLCRTLR ARGEATDVIA VTSARDLATV RAAVSLGIVQ YLIKPFQFAT FRGRLEAYAE
FRRATESADA NSGALQQDEL DRMLDGLRSP RPAQLPRGLS DSTLAALVGI LKAASPLTAA
ELADRAGVSA PTTRRYLEYL TARRLVSGQP RYGGPGRPET VYQWSG