Gene Caci_8187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8187 
Symbol 
ID8339566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9498246 
End bp9498947 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content70% 
IMG OID644961273 
Productglycosyl transferase family 2 
Protein accessionYP_003118851 
Protein GI256397287 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCTG ACAAACGCGT CCTCATCATC ATTCCGGCCT GGAACGAGGC CGGCTCGATA 
GCCGACGTCA TCGCCGAGGT CCGCGGCGAG CTGCCGGACT ACGACGTCCT GGTGGTCAAC
GACGGCTCCA CCGACGACAC CGAGCGCGTG GCCCTGGCCT CCGGCGCCAA GGTCGTCTCG
CTGCCGTACA ACCTCGGCGT CGGCGGCGCC ATGCGCCTGG GCTACCGCTA CGCCGACGAG
AACGACTACG ACATCGCCGT CCAGCTCGAC GCCGACGGCC AGCACGACCC GCGCTACGTC
CCGAAGCTCA TCGCCGGACT CGGCGAGGCG CGCCTGGTCC TCGGCGCGCG CTTCGCCGGC
GAGGGCGACT ACCAGGTGCG CGGACCGCGC TGGTGGGCGA TGAGCCTGCT GTCCCGGGTC
CTGTCCCGGA TGGCGAAGAC CAGGCTGGAC GACACCACCT CCGGCTTCCG CGCCTGCGAC
CGCGAGATCA TCAGGCTCTT CGCGCAGTGG TACCCGGTCG AGTACTTGGG CGACACCGTG
GAGACCCTGG TGCGCGTCAT CCGCCTGGGA TACCCGGTCA GCCAGGTCCC GGTCGCGATG
CGGCAGCGCA CCGCCGGGAC GCCCAGCAAC TCCCCGATCA AGGCGGCGGT GTATCTGGGG
CGCGCGCTGA TCACCCTGCT GCTGGCGGTC AACCGCCGAT GA
 
Protein sequence
MNADKRVLII IPAWNEAGSI ADVIAEVRGE LPDYDVLVVN DGSTDDTERV ALASGAKVVS 
LPYNLGVGGA MRLGYRYADE NDYDIAVQLD ADGQHDPRYV PKLIAGLGEA RLVLGARFAG
EGDYQVRGPR WWAMSLLSRV LSRMAKTRLD DTTSGFRACD REIIRLFAQW YPVEYLGDTV
ETLVRVIRLG YPVSQVPVAM RQRTAGTPSN SPIKAAVYLG RALITLLLAV NRR