Gene Caci_8186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8186 
Symbol 
ID8339565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9497290 
End bp9498189 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content69% 
IMG OID644961272 
Productglycosyl transferase family 2 
Protein accessionYP_003118850 
Protein GI256397286 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCC TCGACATCAT GCTGCCGTAC TACGGCGACG TGGCCCTGAT GCAGACCGCG 
GTGCGGAGCG TCATCGCGCA GTCCGACCCG GACTGGCGGC TGACGGTCGT CGACGACGGC
ACGGAGCCCG GCGTCCCGGA ATGGTTCGCG GCGCTGGACG ATCCGCGCGT GCGCTACCAG
CGCAACGAGC AGAACCTCGG CGTCACCGGC AACTTCAACA AGTGCCTGGA GCTCGCGAAG
TGCGACTACA TGGTGATGAT GGGCACTGAC GACGTCATGC TCCCCGGCTA CGTCGCGCAG
ATCCGCCGCA TCGCCAAGGA GTTCCCCGGC GTCGGCATCA TCCAGCCCGG CGTGGAGGTC
ATCGACAGCG CCGGACGCGT CGTGAACACC ATCGCCGACC AGGCCAAGGC GCGTATCTAC
CTGCCGCGCT TCACCGGCAC GGTCCTGATG GGCGGCGAGG AGCTGGCCGC GAGCCTATTG
CGCGGCTGCT GGTTCTACTT CCCGTCGCTG TGCTGGCGCA CCGAGGCGAT CAAGAAGGCC
AGCTTCCGCG CCGACCTGGA CATCATCCAG GACCTGGCGA TCGTCATCGA CCTCATCGAG
GCCGGCGCGA CCATGGCGCT GTCCGACGAA CTGGCCTTCC AGTACCGGCG GCACGAGGCG
AGCGTCAGCT CCGTGGAGGC GATGGCCGGC AAGCGCTTCG CCGAGGCGCG CCGCTACTTC
GTCGGCGCCG CCGCGCAGAT GGACGCCCTC GGATGGCCGA AGGCGGCGAA GGCGGCCCGG
CGGTACACCG CGTCGCGGCT GCACGCCGTG ACGCTGCTGC CCTCGGCGCT GAAGGCACGC
TCGGCGCCCG GCGTGCGGAA CCTGGCCCGG CACGCTTTCC TGCCCGCACC GAAGCGATGA
 
Protein sequence
MTTLDIMLPY YGDVALMQTA VRSVIAQSDP DWRLTVVDDG TEPGVPEWFA ALDDPRVRYQ 
RNEQNLGVTG NFNKCLELAK CDYMVMMGTD DVMLPGYVAQ IRRIAKEFPG VGIIQPGVEV
IDSAGRVVNT IADQAKARIY LPRFTGTVLM GGEELAASLL RGCWFYFPSL CWRTEAIKKA
SFRADLDIIQ DLAIVIDLIE AGATMALSDE LAFQYRRHEA SVSSVEAMAG KRFAEARRYF
VGAAAQMDAL GWPKAAKAAR RYTASRLHAV TLLPSALKAR SAPGVRNLAR HAFLPAPKR