Gene Caci_8161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8161 
Symbol 
ID8339540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9464167 
End bp9465243 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content72% 
IMG OID644961247 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_003118825 
Protein GI256397261 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCTC ACAACGGCGT GGGGGACAGC GCGCGCACCG AAATGTCGAA CGCCGACCGG 
AGCCAGCGCG CGGGTGCCTC CCGCCACGCC TCCGTTGAGC CCTATCTCGC GGGCTGCGCC
TGGCCGTCCG GCCAGGGCGC GGCCTATCCG CGGGCCGATC CGAAGGATTT CGCCCGGCTG
CCGATCGATA CCTGGGGGAC CGCGACGGTC CCGGTGGGTG TGCGGTTGGA GTTCGCCGGG
GCGGCGCGGG CGATACAGAT CGCCTACCGG ACCAAGACCG CCGACCTGGG GTACCGGGGA
GACGGCGCGG GGACGTTCTT CGCCGCCTAT CAGGGCGAGA AGTTCATCTC CTACGCCGAC
GCCATGCTCG GCGACGGGAT GGCGGTGCTC GACCTCGGCA AGGCGGACGA GTCGCTGCCG
GTCACGGTCT ACCTGCCCGA GGGCATGAAG CCGGAGATCG TGTCGCTGCG GGCCACACAG
GGCGAGCTGC TTCCGGCGCC GAAGCAGCCG CGGTGGATCT GTTACGGCGA CTCCATCGCC
GAGGGGTGGT CCGCCTCCGA GCCGGCGCTG TCGTGGCCGG CGATCGCCGG GCGGATCCAT
GGTCTGGACG TGGTCAACCT CGGATACGCC GGGGCGGCGC GCGGGGAGAT CGTGTCCGCC
GAGCAGATCG CGGCGTTGGA CTCGCCGGCG GTCATCTCGG TCAACCACGG GACGAACTGC
TGGACGCGGA TCCCGCACAG CGCCACCATG ATGATGGCCG GGATGGACGC GTTCCTGCGG
GTGGTGCGCG AGGGGCATCC GGGCGTGCCG ATCGTGGTCT GCTCCCCGGT GCTGCGGCCG
GACGCCGAGG AGACGCGCAA CAAGCTGGGC GCCACGCTGG AGGATCTGCG CGAGGCGATC
GAGGACGTGG TCGTCAGCCG CCGCGAGCGC GGCGACCGCG ATCTGCACCT GGTGCGCGGC
GGCGGCGTCC TGCGCGCCGA GCATCTGGCC GACGGCATCC ACCCGGGCGA CGAGGGGCAC
CGGATCATGG CGCGGGCGTT CGGGGACCCC GTCGCCGAGC GAGCGACGAG AGAGTAA
 
Protein sequence
MTAHNGVGDS ARTEMSNADR SQRAGASRHA SVEPYLAGCA WPSGQGAAYP RADPKDFARL 
PIDTWGTATV PVGVRLEFAG AARAIQIAYR TKTADLGYRG DGAGTFFAAY QGEKFISYAD
AMLGDGMAVL DLGKADESLP VTVYLPEGMK PEIVSLRATQ GELLPAPKQP RWICYGDSIA
EGWSASEPAL SWPAIAGRIH GLDVVNLGYA GAARGEIVSA EQIAALDSPA VISVNHGTNC
WTRIPHSATM MMAGMDAFLR VVREGHPGVP IVVCSPVLRP DAEETRNKLG ATLEDLREAI
EDVVVSRRER GDRDLHLVRG GGVLRAEHLA DGIHPGDEGH RIMARAFGDP VAERATRE