Gene Caci_8116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8116 
Symbol 
ID8339494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9410610 
End bp9412340 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content77% 
IMG OID644961201 
Productphosphoenolpyruvate-protein phosphotransferase 
Protein accessionYP_003118780 
Protein GI256397216 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 
TIGRFAM ID[TIGR01417] phosphoenolpyruvate-protein phosphotransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGAGC GGGCGTCCTC AGGGCTCGAG CGGTCCGAGG CGGTGCGGAC GGCGGAAACA 
GCCGAGTACG AGGGCGTCGG CGTGGGCACC GCCGCGGTCG CCGGACCGGT CGCCCGCATG
GGCCAGGCGC CGCCGGAGCC GCCGGACGTC CCGGCCGCGG GCGACCCCGC CGAGGAGTGC
GCGAAGGCCC TCGCCGCGCT GGCCGCGGTC GCCGCCGACC TGCGCGCCCG CGGCACGGCG
GCCGGCGGCG CCACCGCCGA CGTGCTGGAA GCCCAGGCCA TGATCGCCGA GGACCCGGAG
CTGGCGGACG GCGTGAGGTC CCGCACCGAC GCCGGGAAGA CCGCGGCCCG CGCCGTCCAC
GAGACCTTCG CCGTGTTCCA CGAGACGTTC GCCGCCCTCG GCGACTACAT GGCCGGCCGC
GTCGCCGACC TCGACGACAT CGCCGCCCGC GCGGTCGCCG TCGCCTCCGG CGTGCCGGTG
CCGGGACCGC CGTGCCGCGA GGAGCCCTAT GTCCTGCTCG CCGCCGACCT CGCGCCGGCC
GACACCGCCC TGCTCGACCG GCGCCTGGTC CTGGCCCTGG TCACCGCCGA GGGCGGCCCG
ACCTCGCACA CCGCGATCCT GGCCCGCGCC ATGGGCATCC CCGCCGTCGT CGGCGCCGCC
GGGGTCCTGG CGCTGACCGA CGGCACGCCG GTGCTGGTCG ACGCCGCGGC CGGGACGGTG
GTCGCGCATC CCTCGACCGA GGCGATGGAG GCGGCGATCG CGCGCTGCTG CGCGGACGCG
GCGGCGGCGG CGCTCACCGG ACCGGGACGG ACCTCGGACG GCACGCCGGT GAAGCTGCTG
GCGAACATCG GCGGTCCCGA GGACGTGCCG GCGGCACTGG TGTCCGGCGC GGAGGGCGTC
GGCCTGTTCC GGACCGAGTT CCTGTATCTG GACACGGACG AACCGCCGAC CTTCGACGCG
CAGGTCAAGA TCTATAAAGA GGTGTTCGAC GCGTTCGGCG AGGACACCCG CGTGGTGGTG
CGGACCCTGG ACGCCGGGGC GGACAAGCCG CTGCCGTTCG TCCGGCTCGG CGAGGAGCCG
AACCCGGCTC TGGGCGTCCG CGGGCTCCGC GCGTTCCGCG CCTTCGGAGG ACGCAACGAG
GCGATCCTGC GCACGCAGCT GCTGGCGATC CGCGAGGCGG CCGGGACCAG CGCCCCCGAG
GTCTGGGTGA TGGCGCCGAT GGTCGACGAG GTGACCGAGG CGGAGTGGTT CTGCGAGCTG
GCCGCCGCCT GCGGTCTGGA CGTGGCCGGC GGCCGCGTCG GCATCATGGT CGAGACCCCC
GCCTCCGCCC TGACCGCCGG GGCGATCCTG GCCGGGCGCA CCGGCTTCGC CTCGATCGGC
ACCAACGACC TGACGCAGTA CACGATGGCC GCCGACCGCG TGCTCGGCGC CGTCGGGGCG
CTGCAGGACC CGTGGCATCC GGCGGTCCTG CAGCTGATCG GCGCGGCCGG GAGCGCCGGC
GCGGCGGCCG GCAAGCCGCT CGGGGTGTGC GGCGAGGCCG CCGCCGACCC GCTGCTGGCC
TGCGTCCTGG TCGGGCTGGG AGTGCGCTCC TTGTCTATGG CGCCCTCGGC GATCGCGGAG
GTGCGGGCGG CTCTGGCGGC GCGGAGCCTC GAGGACTGCA CGGCGATGGC GGCGCGCGCC
GCGGGCTCGG CGACCGCCTG GGACGCCCGG AAAGCGGCGT TGCGGTCGTG A
 
Protein sequence
MGERASSGLE RSEAVRTAET AEYEGVGVGT AAVAGPVARM GQAPPEPPDV PAAGDPAEEC 
AKALAALAAV AADLRARGTA AGGATADVLE AQAMIAEDPE LADGVRSRTD AGKTAARAVH
ETFAVFHETF AALGDYMAGR VADLDDIAAR AVAVASGVPV PGPPCREEPY VLLAADLAPA
DTALLDRRLV LALVTAEGGP TSHTAILARA MGIPAVVGAA GVLALTDGTP VLVDAAAGTV
VAHPSTEAME AAIARCCADA AAAALTGPGR TSDGTPVKLL ANIGGPEDVP AALVSGAEGV
GLFRTEFLYL DTDEPPTFDA QVKIYKEVFD AFGEDTRVVV RTLDAGADKP LPFVRLGEEP
NPALGVRGLR AFRAFGGRNE AILRTQLLAI REAAGTSAPE VWVMAPMVDE VTEAEWFCEL
AAACGLDVAG GRVGIMVETP ASALTAGAIL AGRTGFASIG TNDLTQYTMA ADRVLGAVGA
LQDPWHPAVL QLIGAAGSAG AAAGKPLGVC GEAAADPLLA CVLVGLGVRS LSMAPSAIAE
VRAALAARSL EDCTAMAARA AGSATAWDAR KAALRS