| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8107 |
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| Symbol | |
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| ID | 8339485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9401925 |
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| End bp | 9403571 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644961192 |
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| Product | helicase domain protein |
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| Protein accession | YP_003118771 |
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| Protein GI | 256397207 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTGCC TGATCGTCCA GTCCGACAAG ACCCTCCTGC TCGAGATCGA CCACCCGCAG
GCCGAGGAGT GCCGCCGGGA CATCGCCCCG TTCGCCGAGC TGGAGCGCTC GCCGGAGCAC
ATCCACACCT ACCGCGTCAC GCCGCTGGCG CTGTGGAACG CGCGCGCCGC CGGCCACGAC
GCCGAGCAGG TCATCGACGC GCTGCTGCGC CACACCCGCT ACCCGGTGCC GCACTCGCTG
CTGGTCGACA TCGCCGACAC CATGGACCGC TACGGCCGCC TGCGGCTGCT GCAGCACCCG
ACGCACGGCC TGGTCCTGGA GACCACCGAC GTCCCGGTGC TGGAGGAGGT GATCCGCCAC
AAAAAGGTGC AGCCGCTGAT CGGCGCCCGG CTCGACGAGC ACACCATCAA GGTCCACCCC
TCCGAGCGCG GGACCCTGAA GCAGGTGCTG CTGAAGGTCG GCTGGCCGGC CGAGGACCTG
GCGGGCTACG TGGACGGCGA GCACCACGAC ATCGCCCTGC GCGAGGACGG CTGGACCCTG
CGTCCGTACC AGAAGGACGC CGCCGAGGGC TTCCGCCACG GCGGCTCCGG CGTGATCGTG
CTCCCCTGCG GCGCGGGCAA GACCATCGTC GGCGCGGCGG CCATGGCCGG GGTCGAGGCG
ACGACGCTGA TCCTGGTCAC CAACACCGTC AGCGTCCACC AGTGGCGCAA GGAACTGCTC
AAGCGCACCA CGCTGACCGA CGAGGAGATC GGCGAGTATT CGGGCGCCCG CAAGGAGATC
CGCCCGGTCA CCATCGCCAC CTACCAGGTC CTCACGCGCA AGACGAAGGG CGTCTACGCC
AACCTGGAGC TGTTCGACGC CCGCGACTGG GGACTGATCG TCTACGACGA GGTCCACCTG
CTGCCGGCGC CGGTCTTCCG CTTCACCGCC GACATCCAGT CCCGCCGCCG CCTCGGACTG
ACGGCCACCC TGGTCCGTGA AGACGGCTTG GAAGGCGAGG TCTTCTCGCT GATCGGTCCC
AAGCGCTTCG ACGCCCCGTG GAAGGACATC GAGGCGCAGG GCTACATCGC CCCGGCGGAC
TGCGTCGAGG TCCGCGTCAC CCTCACCGAC CACGAGCGCC TGCGCTACGC CAGCTCCGAG
CCGGAGGAGA AGTACCGCAT CGCCTCGACC ACGGCGACCA AGTCCACGCT CGTGGAAGCC
CTGGTGAAGA AGCACGCCGG CGAGCCCACC CTGGTCATCG GCCAGTACCT GGAGCAGCTG
GACGACCTCG GCGCGCGGCT GAACGCCCCG GTCCTGAAGG GCAGCACCAC GGTGAAGGAG
CGCGAGCGCC TGTACGAGGG CTTCCGCACC GGCGAGATCC CCACCCTGGT GGTCTCGAAG
GTCGCGAACT TCTCCGTCGA CCTGCCCGAG GCGAGCGTGG CGATCCAGGT GTCCGGCACG
TTCGGCTCCC GCCAGGAGGA GGCGCAGCGG CTGGGACGCG TGCTGCGCCC GAAGGCCGAC
GGCCGCGGCG CGCGCTTCTA CGCCGTGGTC TCCCGCGACA CCGTGGACCA GGAGTACGCG
GCGCACCGGC AGCGGTTCCT TGCGGAGCAG GGGTACGCAT ACCGGATCGC CGACGCCGAC
GACGTGTTCG CCGGCAAGGA CATCTAA
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| Protein sequence | MTCLIVQSDK TLLLEIDHPQ AEECRRDIAP FAELERSPEH IHTYRVTPLA LWNARAAGHD
AEQVIDALLR HTRYPVPHSL LVDIADTMDR YGRLRLLQHP THGLVLETTD VPVLEEVIRH
KKVQPLIGAR LDEHTIKVHP SERGTLKQVL LKVGWPAEDL AGYVDGEHHD IALREDGWTL
RPYQKDAAEG FRHGGSGVIV LPCGAGKTIV GAAAMAGVEA TTLILVTNTV SVHQWRKELL
KRTTLTDEEI GEYSGARKEI RPVTIATYQV LTRKTKGVYA NLELFDARDW GLIVYDEVHL
LPAPVFRFTA DIQSRRRLGL TATLVREDGL EGEVFSLIGP KRFDAPWKDI EAQGYIAPAD
CVEVRVTLTD HERLRYASSE PEEKYRIAST TATKSTLVEA LVKKHAGEPT LVIGQYLEQL
DDLGARLNAP VLKGSTTVKE RERLYEGFRT GEIPTLVVSK VANFSVDLPE ASVAIQVSGT
FGSRQEEAQR LGRVLRPKAD GRGARFYAVV SRDTVDQEYA AHRQRFLAEQ GYAYRIADAD
DVFAGKDI
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